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NECEvent2014_7_1_scaffold_58

Alias: 177_001_scaffold_58

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Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_58_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..509)
DNA (507bp) protein (169aa)
Bicyclomycin resistance protein n=1 Tax=Escherichia coli P0299438.3 RepID=N2XNA0_ECOLX
bcr; bicyclomycin/multidrug efflux system
Bicyclomycin resistance protein {ECO:0000313|EMBL:CBJ01823.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_7_1_scaffold_58_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(537..1232)
DNA (696bp) protein (232aa)
rsuA; 16s rRNA pseudouridylate synthase A (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Pseudouridine synthase n=7 Tax=Enterobacteriaceae RepID=D2AEZ4_SHIF2 rbh
NECEvent2014_7_1_scaffold_58_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1381..3141
DNA (1761bp) protein (587aa)
Uncharacterized protein YejH n=86 Tax=Escherichia coli RepID=YEJH_ECOLI rbh
putative helicase rbh
Predicted ATP-dependet helicase {ECO:0000313|EMBL:CDP70775.1}; Putative ATP-dependent DNA or RNA helicase {ECO:0000313|EMBL:AKF56030.1}; Type III restriction enzyme, res subunit {ECO:0000313|EMBL:CEE0
NECEvent2014_7_1_scaffold_58_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3266..3550
DNA (285bp) protein (95aa)
50S ribosomal protein L25 n=1 Tax=Shigella flexneri serotype 5b (strain 8401) RepID=Q0T2T6_SHIF8
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01336, ECO:0000256|SAAS:SAAS00147491}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_7_1_scaffold_58_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3689..4696)
DNA (1008bp) protein (336aa)
Nucleoid-associated protein YejK n=163 Tax=Enterobacteriaceae RepID=NDPA_ECOBW rbh
yejK; nucleoid-associated protein NdpA rbh
Nucleoid-associated protein YejK {ECO:0000256|HAMAP-Rule:MF_00730}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_1_scaffold_58_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4878..5105
DNA (228bp) protein (76aa)
UPF0352 protein YejL n=1208 Tax=Enterobacteriaceae RepID=YEJL_ECO55
hypothetical protein
UPF0352 protein YejL {ECO:0000256|HAMAP-Rule:MF_00816}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_58_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5125..6885
DNA (1761bp) protein (587aa)
Inner membrane protein YejM n=841 Tax=Escherichia RepID=YEJM_ECO57 rbh
Inner membrane protein yejM {ECO:0000313|EMBL:KDY68400.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
yejM; putative hydrolase, inner membrane
NECEvent2014_7_1_scaffold_58_trna_1
unknown

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6960..7033
DNA (74bp)
transferRNA
NECEvent2014_7_1_scaffold_58_8
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7015..7221)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=S1DHA1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KJX34543.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae compl
hypothetical protein
NECEvent2014_7_1_scaffold_58_9
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7221..7460)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae UCICRE 12 RepID=V3DFB4_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:KJX34542.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae compl
hypothetical protein
NECEvent2014_7_1_scaffold_58_10
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7561..7827
DNA (267bp) protein (89aa)
Virulence protein msgA n=2 Tax=Enterobacter cloacae complex RepID=V3DYR5_ENTCL
Virulence protein MsgA {ECO:0000313|EMBL:KJW82025.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae comple
virulence protein msgA
NECEvent2014_7_1_scaffold_58_11
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7876..8424)
DNA (549bp) protein (183aa)
DNA-invertase lambdoid prophage e14 n=1 Tax=Enterobacter cloacae BWH 29 RepID=V3IZX0_ENTCL rbh
DNA-invertase {ECO:0000313|EMBL:KJO78274.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" sour
DNA-invertase
NECEvent2014_7_1_scaffold_58_12
Enterobacteria phage HK140, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

8552..9385
DNA (834bp) protein (278aa)
Tail fiber n=1 Tax=Enterobacteria phage HK140 RepID=K7P6T0_9CAUD rbh
Tail fiber {ECO:0000313|EMBL:AFH20266.1}; TaxID=1147143 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" source="Enteroba
hypothetical protein
NECEvent2014_7_1_scaffold_58_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9447..10523)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE108 RepID=S1I0I1_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:EOW21322.1}; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_7_1_scaffold_58_14
Enterobacteria phage mEp237, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(10532..11965)
DNA (1434bp) protein (478aa)
Phage tail fiber protein n=1 Tax=Escherichia coli SCD1 RepID=U9VUX4_ECOLX rbh
Tail fiber {ECO:0000313|EMBL:AFM76179.1}; TaxID=1147151 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" source="Enteroba
side tail fiber protein
NECEvent2014_7_1_scaffold_58_15
Lelliottia amnigena, Lelliottia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12008..12250
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE108 RepID=S1I0Q6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KDM55877.1}; TaxID=1439331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Lelliottia.;" source="Lelliottia amn
NECEvent2014_7_1_scaffold_58_16
Enterobacterial phage mEp213, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(12371..13045)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. MGH 8 RepID=U7CQ15_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:AFM76360.1}; TaxID=1147156 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" sou
hypothetical protein
NECEvent2014_7_1_scaffold_58_17
Enterobacterial phage mEp213, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(13045..13347)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=unclassified Lambda-like viruses RepID=K7PHM8_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AFM76359.1}; TaxID=1147156 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" sou
hypothetical protein
NECEvent2014_7_1_scaffold_58_18
Enterobacteria phage phi80, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(13347..16823)
DNA (3477bp) protein (1159aa)
Host specificity protein (Tail fiber protein) n=1 Tax=Enterobacteria phage phi80 RepID=M9P0D8_BPPH8 rbh
Host specificity protein (Tail fiber protein) {ECO:0000313|EMBL:AFV29161.1}; TaxID=10713 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda
host specificity protein
NECEvent2014_7_1_scaffold_58_19
Enterobacteria phage phi80, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(16888..17400)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Enterobacteria phage phi80 RepID=M9NZH8_BPPH8 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFV29160.1}; TaxID=10713 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" sourc
NECEvent2014_7_1_scaffold_58_20
Enterobacteria phage phi80, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(17453..18070)
DNA (618bp) protein (206aa)
Tail assembly protein n=1 Tax=Enterobacteria phage phi80 RepID=M9NZA3_BPPH8 rbh
tail protein
Tail assembly protein {ECO:0000313|EMBL:AFV29159.1}; TaxID=10713 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" source=
NECEvent2014_7_1_scaffold_58_21
Enterobacterial phage mEp213, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(18063..18782)
DNA (720bp) protein (240aa)
Phage tail assembly protein n=1 Tax=Escherichia coli Nissle 1917 RepID=L8CN43_ECOLX rbh
Tail assembly protein {ECO:0000313|EMBL:AFM76356.1}; TaxID=1147156 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" sourc
peptidase P60 rbh
NECEvent2014_7_1_scaffold_58_22
Enterobacteria phage mEp043 c-1, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(18785..19522)
DNA (738bp) protein (246aa)
Phage minor tail protein n=1 Tax=Escherichia coli Nissle 1917 RepID=L8CNS3_ECOLX rbh
Minor tail protein {ECO:0000313|EMBL:AFM76429.1}; TaxID=1147149 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" source="
hypothetical protein rbh
NECEvent2014_7_1_scaffold_58_23
Enterobacterial phage mEp213, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(19579..19917)
DNA (339bp) protein (113aa)
Minor tail protein n=5 Tax=root RepID=E4WL34_BPPH8
Minor tail protein {ECO:0000313|EMBL:AFM76354.1}; TaxID=1147156 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" source="
tail protein
NECEvent2014_7_1_scaffold_58_24
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19914..23051)
DNA (3138bp) protein (1046aa)
Phage tail length tape-measure protein 1 n=1 Tax=Escherichia coli Nissle 1917 RepID=L8CQ00_ECOLX rbh
Tail protein {ECO:0000313|EMBL:KJX34531.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" sourc
Phage tail length tape-measure protein 1
NECEvent2014_7_1_scaffold_58_25
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23035..23307)
DNA (273bp) protein (91aa)
Phage minor tail protein n=2 Tax=Enterobacteriaceae RepID=L8CN68_ECOLX
Phage tail assembly protein T {ECO:0000313|EMBL:ESL82600.1}; TaxID=1329856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter clo
tail protein
NECEvent2014_7_1_scaffold_58_26
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23358..23789)
DNA (432bp) protein (144aa)
Phage minor tail protein n=2 Tax=Enterobacteriaceae RepID=L8CN48_ECOLX
Tail protein {ECO:0000313|EMBL:KJX34529.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" sourc
tail protein
NECEvent2014_7_1_scaffold_58_27
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23800..24543)
DNA (744bp) protein (248aa)
Ig domain protein group 2 domain protein n=3 Tax=Enterobacteriaceae RepID=S7UCS3_ENTCL rbh
Tail fiber protein {ECO:0000313|EMBL:KJX34528.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;"
tail fiber protein rbh
NECEvent2014_7_1_scaffold_58_28
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24553..24954)
DNA (402bp) protein (134aa)
Tail protein U n=4 Tax=root RepID=K7PHM6_9CAUD
Minor tail protein U
Minor tail protein U {ECO:0000313|EMBL:KJO65832.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
NECEvent2014_7_1_scaffold_58_29
Enterobacterial phage mEp213, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(24951..25529)
DNA (579bp) protein (193aa)
Putative phage tail component n=1 Tax=Escherichia coli Nissle 1917 RepID=L8CQ04_ECOLX rbh
tail protein rbh
Minor tail protein Z {ECO:0000313|EMBL:AFM76348.1}; TaxID=1147156 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" source
Displaying items 1-30 of 64 in total

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