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NECEvent2014_7_1_scaffold_79

Alias: 177_001_scaffold_79

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_79_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231..899)
DNA (669bp) protein (223aa)
Uncharacterized protein n=58 Tax=Escherichia coli RepID=C8TTL2_ECO26 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EYV57969.1}; TaxID=1446502 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_79_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1006..1239)
DNA (234bp) protein (78aa)
UPF0033 protein YedF n=1782 Tax=Enterobacteriaceae RepID=YEDF_ECO57
yedF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG34916.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_1_scaffold_79_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1236..2441)
DNA (1206bp) protein (402aa)
UPF0394 inner membrane protein YedE n=120 Tax=Enterobacteriaceae RepID=YEDE_ECOLI rbh
yedE; putative inner membrane protein
UPF0394 inner membrane protein yedE {ECO:0000313|EMBL:KDG96175.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_7_1_scaffold_79_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2628..3041
DNA (414bp) protein (138aa)
Uncharacterized protein n=865 Tax=Enterobacteriaceae RepID=C3T502_ECOLX
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EII19430.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_1_scaffold_79_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3075..4562)
DNA (1488bp) protein (496aa)
alpha-amylase (EC:3.2.1.1)
Cytoplasmic alpha-amylase n=3 Tax=Escherichia coli RepID=M7VGG5_ECOLX rbh
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:KDX21565.1}; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_7_1_scaffold_79_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4640..5005)
DNA (366bp) protein (122aa)
Flagellar protein FliT n=5 Tax=Escherichia coli RepID=E9YPB8_ECOLX
Flagellar protein FliT {ECO:0000313|EMBL:EGB63750.1}; TaxID=656420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
fliT; flagellar biosynthesis protein FliT
NECEvent2014_7_1_scaffold_79_7
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5005..5415)
DNA (411bp) protein (137aa)
Flagellar biosynthesis repressor of class 3a and 3b operons (RflA activity) n=769 Tax=Enterobacteriaceae RepID=E2QNC1_ECOLX
fliS; flagellar protein FliS
Flagellar protein FliS {ECO:0000313|EMBL:EIQ33260.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 96
NECEvent2014_7_1_scaffold_79_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5431..6846)
DNA (1416bp) protein (472aa)
Flagellar hook-associated protein FliD n=2 Tax=Escherichia coli RepID=K3JYM2_ECOLX rbh
Flagellar capping protein {ECO:0000313|EMBL:EIL57549.1}; TaxID=752785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
fliD; Flagellar hook-associated protein 2 rbh
NECEvent2014_7_1_scaffold_79_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7092..8390
DNA (1299bp) protein (433aa)
FliC n=4 Tax=Escherichia coli RepID=Q842B4_ECOLX rbh
FliC {ECO:0000313|EMBL:AAP13327.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
flagellin rbh
NECEvent2014_7_1_scaffold_79_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8552..9271
DNA (720bp) protein (240aa)
RNA polymerase sigma factor FliA n=959 Tax=Enterobacteriaceae RepID=FLIA_ECO57 rbh
fliA; flagellar biosynthesis sigma factor
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma
NECEvent2014_7_1_scaffold_79_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9317..9868
DNA (552bp) protein (184aa)
Flagella biosynthesis protein FliZ n=164 Tax=Escherichia RepID=G7RA29_ECOC2 rbh
putative flagellar biosynthesis protein
Flagella biosynthesis protein FliZ {ECO:0000313|EMBL:AJO83907.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_7_1_scaffold_79_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9899..10756
DNA (858bp) protein (286aa)
Cystine-binding periplasmic protein n=1 Tax=Escherichia coli UMEA 3240-1 RepID=T9H7Y6_ECOLX rbh
cystine transporter subunit
Cystine-binding periplasmic protein {ECO:0000313|EMBL:EOV76225.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_7_1_scaffold_79_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10861..11847
DNA (987bp) protein (329aa)
yedO; D-cysteine desulfhydrase (EC:4.4.1.15)
D-cysteine desulfhydrase {ECO:0000256|HAMAP-Rule:MF_01045}; EC=4.4.1.15 {ECO:0000256|HAMAP-Rule:MF_01045};; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
D-cysteine desulfhydrase n=419 Tax=Enterobacteriaceae RepID=DCYD_ECO55 rbh
NECEvent2014_7_1_scaffold_79_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11862..12530
DNA (669bp) protein (223aa)
Inner membrane amino-acid ABC transporter permease protein YecS n=1080 Tax=Enterobacteriaceae RepID=YECS_ECOL6 rbh
putative transporter subunit
Inner membrane amino-acid ABC transporter permease protein yecS {ECO:0000313|EMBL:EZK21957.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
NECEvent2014_7_1_scaffold_79_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12527..13279
DNA (753bp) protein (251aa)
Uncharacterized amino-acid ABC transporter ATP-binding protein YecC n=60 Tax=Escherichia coli RepID=YECC_ECOLI rbh
ABC transporter rbh
Putative amino-acid ABC transporter ATP-binding protein YecC {ECO:0000313|EMBL:EIL57556.1}; TaxID=752785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_7_1_scaffold_79_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13509..14231
DNA (723bp) protein (241aa)
DNA-binding transcriptional activator n=73 Tax=Escherichia coli RepID=B7L8S9_ECO55 rbh
DNA-binding transcriptional activator SdiA rbh
Regulatory protein SdiA {ECO:0000313|EMBL:EFU37221.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_1_scaffold_79_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14299..14523)
DNA (225bp) protein (75aa)
Uncharacterized protein YecF n=1180 Tax=Enterobacteriaceae RepID=YECF_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV98108.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_79_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14982..15638
DNA (657bp) protein (219aa)
Response regulator UvrY n=343 Tax=Enterobacteriaceae RepID=UVRY_ECOLI rbh
Response regulator {ECO:0000313|EMBL:EMD11524.1}; Flags: Fragment;; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
response regulator
NECEvent2014_7_1_scaffold_79_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15635..17467
DNA (1833bp) protein (611aa)
UvrABC system protein C n=1043 Tax=Enterobacteriaceae RepID=UVRC_ECO24 rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit C
NECEvent2014_7_1_scaffold_79_20
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17524..18072
DNA (549bp) protein (183aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:5.4.3.8)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000256|HAMAP-Rule:MF_01437}; EC=2.7.8.5 {ECO:0000256|HAMAP-Rule:MF_01437};; Phosphatidylglycerophosphate synthase {ECO:0000256|
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1265 Tax=Enterobacteriaceae RepID=PGSA_ECO57 rbh
NECEvent2014_7_1_scaffold_79_trna_1
unknown

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18224..18296
DNA (73bp)
transferRNA
NECEvent2014_7_1_scaffold_79_trna_2
unknown

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18353..18423
DNA (71bp)
transferRNA
NECEvent2014_7_1_scaffold_79_trna_3
unknown

Not on your lists

18439..18522
DNA (84bp)
transferRNA
NECEvent2014_7_1_scaffold_79_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18721..19386
DNA (666bp) protein (222aa)
Uncharacterized protein YecA n=409 Tax=Enterobacteriaceae RepID=YECA_ECOLI rbh
yecA family protein
YecA family protein {ECO:0000313|EMBL:KDU55679.1}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_7_1_scaffold_79_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19448..20659)
DNA (1212bp) protein (404aa)
Tyrosine-specific transport protein n=284 Tax=Enterobacteriaceae RepID=A7ZN34_ECO24 rbh
tyrP; tyrosine transporter
Aromatic amino acid transport protein {ECO:0000313|EMBL:EFJ86847.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_1_scaffold_79_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20850..21089
DNA (240bp) protein (80aa)
Uncharacterized protein n=15 Tax=Enterobacteriaceae RepID=Q32HD6_SHIDS
yecH; hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFF13168.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_1_scaffold_79_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21127..21624)
DNA (498bp) protein (166aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
Ferritin-1 n=1401 Tax=Enterobacteriaceae RepID=FTNA_ECO57 rbh
ferritin
NECEvent2014_7_1_scaffold_79_25
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21795..22118)
DNA (324bp) protein (108aa)
Uncharacterized protein n=110 Tax=Enterobacteriaceae RepID=J7QS99_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB65744.1}; TaxID=300268 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii s
NECEvent2014_7_1_scaffold_79_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22582..22833
DNA (252bp) protein (84aa)
Uncharacterized protein YecJ n=1044 Tax=Enterobacteriaceae RepID=YECJ_ECOL6
yecJ; YecJ protein
Uncharacterized protein {ECO:0000313|EMBL:EZK22604.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_79_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22912..23415)
DNA (504bp) protein (168aa)
Ferritin-like protein 2 n=1302 Tax=Enterobacteriaceae RepID=FTNB_ECO57 rbh
ferritin-like protein
Ferritin-like protein 2 {ECO:0000313|EMBL:EFE62545.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
Displaying items 1-30 of 51 in total

View Taxonomy