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NECEvent2014_7_1_scaffold_399

Alias: 177_001_scaffold_399

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_399_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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78..902
DNA (825bp) protein (275aa)
6-phosphogluconate dehydrogenase NAD-binding n=67 Tax=Enterobacteriaceae RepID=E0J159_ECOLW rbh
yeeZ; epimerase
Enzyme of sugar metabolism {ECO:0000313|EMBL:AIF61137.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_1_scaffold_399_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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927..1877
DNA (951bp) protein (317aa)
LysR substrate binding domain-containing protein n=78 Tax=Escherichia coli RepID=E9Y0E7_ECOLX rbh
LysR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ESK35481.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_1_scaffold_399_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2144..3502
DNA (1359bp) protein (453aa)
Low-affinity putrescine importer PlaP n=1034 Tax=Enterobacteriaceae RepID=PLAP_ECO57 rbh
amino acid permease
Inner membrane transporter YeeF {ECO:0000313|EMBL:EOV61275.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_1_scaffold_399_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3735..4739
DNA (1005bp) protein (335aa)
Uncharacterized protein n=14 Tax=Enterobacteriaceae RepID=N2P910_ECOLX rbh
Inner membrane protein {ECO:0000313|EMBL:ELC08212.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
membrane protein
NECEvent2014_7_1_scaffold_399_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4753..4980
DNA (228bp) protein (76aa)
Uncharacterized protein n=65 Tax=Enterobacteriaceae RepID=C8U556_ECO10
yeeD; hypothetical protein
Membrane protein {ECO:0000313|EMBL:KDV56559.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O12
NECEvent2014_7_1_scaffold_399_6
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5023..6450)
DNA (1428bp) protein (476aa)
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=766141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
sbcB; exonuclease I (EC:3.1.11.1)
Exodeoxyribonuclease I n=27 Tax=Enterobacteriaceae RepID=E7J719_ECOLX rbh
NECEvent2014_7_1_scaffold_399_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6659..7825
DNA (1167bp) protein (389aa)
dacD; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase dacD n=1 Tax=Escherichia coli KTE108 RepID=S1HUL9_ECOLX rbh
D-alanyl-D-alanine carboxypeptidase dacD {ECO:0000313|EMBL:EOW19177.1}; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_7_1_scaffold_399_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7944..8417
DNA (474bp) protein (158aa)
DNA gyrase inhibitor n=21 Tax=Escherichia coli RepID=B7MWT0_ECO81 rbh
sbmC; DNA gyrase inhibitor rbh
DNA gyrase inhibitor {ECO:0000256|HAMAP-Rule:MF_01896}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_1_scaffold_399_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8616..9674
DNA (1059bp) protein (353aa)
Inner membrane protein YeeA n=305 Tax=Enterobacteriaceae RepID=YEEA_ECOLI rbh
yeeA; hypothetical protein
Inner membrane protein yeeA {ECO:0000313|EMBL:EQX88111.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_1_scaffold_399_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9846..10175
DNA (330bp) protein (110aa)
Putative alpha helix protein n=1 Tax=Shigella boydii serotype 4 (strain Sb227) RepID=Q323K5_SHIBS
hypothetical protein
UPF0265 protein YeeX {ECO:0000256|HAMAP-Rule:MF_00683}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_1_scaffold_399_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10276..10542)
DNA (267bp) protein (89aa)
Ethanolamine utilization-propanediol utilization n=17 Tax=Escherichia coli RepID=E9Y0D8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EIF83067.1}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
eutP/pduV family protein
NECEvent2014_7_1_scaffold_399_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10732..11511)
DNA (780bp) protein (260aa)
Transposase for insertion sequence IS100 n=1 Tax=Yersinia pestis INS RepID=K8Q0U7_YERPE
insertion sequence IS100, ATP-binding protein rbh
IstB-like ATP binding family protein {ECO:0000313|EMBL:EMX84592.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_1_scaffold_399_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11511..12533)
DNA (1023bp) protein (341aa)
Transposase n=54 Tax=Enterobacteriaceae RepID=Q3ZU61_ECOLX rbh
transposase for insertion sequence IS100 rbh
Integrase core domain protein {ECO:0000313|EMBL:EFO56376.1}; TaxID=679204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_7_1_scaffold_399_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13591..14352)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3703-1 RepID=T9T7N8_ECOLX
phosphotriesterase family protein
Uncharacterized protein {ECO:0000313|EMBL:ELJ76546.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Displaying 14 items

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