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NECEvent2014_7_1_scaffold_605

Alias: 177_001_scaffold_605

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_605_1
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..219)
DNA (219bp) protein (73aa)
30S ribosomal protein S1 n=1 Tax=Escherichia coli 2866750 RepID=M8UUF4_ECOLX
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental samples
NECEvent2014_7_1_scaffold_605_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(330..1013)
DNA (684bp) protein (228aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1349 Tax=Enterobacteriaceae RepID=KCY_ECO24 rbh
NECEvent2014_7_1_scaffold_605_3
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1186..1950)
DNA (765bp) protein (255aa)
Peptidase, M48B family n=576 Tax=Enterobacteriaceae RepID=A7ZJZ8_ECO24 rbh
ycaL; putative peptidase with chaperone function
Putative heat shock protein,Uncharacterized metalloprotease yggG,heat shock protein HtpX,Putative Zn-dependent protease, contains TPR repeats,Peptidase family M48 {ECO:0000313|EMBL:CDX06188.1}; TaxID=
NECEvent2014_7_1_scaffold_605_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2119..3402)
DNA (1284bp) protein (428aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=54 Tax=Escherichia coli RepID=AROA_ECOHS rbh
3-phosphoshikimate 1-carboxyvinyltransferase rbh
NECEvent2014_7_1_scaffold_605_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3473..4561)
DNA (1089bp) protein (363aa)
serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
Phosphoserine aminotransferase n=366 Tax=Enterobacteriaceae RepID=SERC_ECO55 rbh
NECEvent2014_7_1_scaffold_605_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4760..5452)
DNA (693bp) protein (231aa)
UPF0702 transmembrane protein YcaP n=577 Tax=Enterobacteriaceae RepID=YCAP_ECOLI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO26870.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_605_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5582..7342
DNA (1761bp) protein (587aa)
Uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=Q31YU6_SHIBS rbh
ycaO; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ENB14865.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_605_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7748..8605
DNA (858bp) protein (286aa)
Probable formate transporter 1 n=853 Tax=Enterobacteriaceae RepID=FOCA_ECO57 rbh
focA_2; formate transporter
Putative formate transporter 1 (Formate channel 1) {ECO:0000313|EMBL:EGI22259.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
NECEvent2014_7_1_scaffold_605_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8660..10240
DNA (1581bp) protein (527aa)
Formate acetyltransferase 1 n=1 Tax=Escherichia coli HVH 77 (4-2605759) RepID=T6JMI0_ECOLX
pflB; formate acetyltransferase 1
Formate acetyltransferase {ECO:0000313|EMBL:EGI10447.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
Displaying 9 items

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