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NECEvent2014_7_1_scaffold_705

Alias: 177_001_scaffold_705

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_705_trna_1
unknown

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comp(3..75)
DNA (73bp)
transferRNA
NECEvent2014_7_1_scaffold_705_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(182..757)
DNA (576bp) protein (192aa)
HTH-type transcriptional regulator YjdC n=1187 Tax=Enterobacteriaceae RepID=YJDC_ECOL6 rbh
yjdC; transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ESD85489.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_7_1_scaffold_705_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(794..2491)
DNA (1698bp) protein (566aa)
Thiol:disulfide interchange protein DsbD {ECO:0000256|HAMAP-Rule:MF_00399}; EC=1.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00399};; Protein-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_00399}; Flags: Precurs
Thiol:disulfide interchange protein DsbD n=14 Tax=Escherichia coli RepID=E2X242_ECOLX rbh
dipZ; fused thiol: disulfide interchange protein: activator of DsbC/hypothetical protein
NECEvent2014_7_1_scaffold_705_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2467..2805)
DNA (339bp) protein (113aa)
Divalent-cation tolerance protein CutA n=986 Tax=Enterobacteriaceae RepID=CUTA_ECO24
divalent-cation tolerance protein CutA
Divalent-cation tolerance protein CutA {ECO:0000256|HAMAP-Rule:MF_01160}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_7_1_scaffold_705_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2921..4222)
DNA (1302bp) protein (434aa)
Anaerobic C4-dicarboxylate transporter DcuA n=811 Tax=Enterobacteriaceae RepID=DCUA_ECO57 rbh
dcuA; anaerobic C4-dicarboxylate transporter
Anaerobic C4-dicarboxylate transporter {ECO:0000256|PIRNR:PIRNR004539}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_7_1_scaffold_705_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4340..5776)
DNA (1437bp) protein (479aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=1268996 species="Bacteria; Proteobacteria;
Aspartate ammonia-lyase n=1368 Tax=Bacteria RepID=ASPA_ECO57 rbh
NECEvent2014_7_1_scaffold_705_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6113..6589
DNA (477bp) protein (159aa)
UPF0716 protein FxsA n=586 Tax=Enterobacteriaceae RepID=FXSA_ECOLI rbh
fxsA; inner membrane protein
FxsA protein {ECO:0000313|EMBL:ESD65229.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.
NECEvent2014_7_1_scaffold_705_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6605..7861)
DNA (1257bp) protein (419aa)
Amino acid permease n=14 Tax=Escherichia RepID=D8AP61_ECOLX rbh
Amino acid permease {ECO:0000313|EMBL:EFK15056.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M
yjeH; transporter
NECEvent2014_7_1_scaffold_705_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8137..8430
DNA (294bp) protein (98aa)
10 kDa chaperonin n=1413 Tax=Enterobacteriaceae RepID=CH10_ECO24
groS; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1125642 spec
NECEvent2014_7_1_scaffold_705_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8474..9094
DNA (621bp) protein (207aa)
60 kDa chaperonin n=1 Tax=Escherichia coli p0305293.8 RepID=N4KVM2_ECOLX
groL; chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=749544 speci
Displaying 10 items

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