ggKbase home page

NECEvent2014_7_1_scaffold_780

Alias: 177_001_scaffold_780

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_780_1

Not on your lists

1..285
DNA (285bp) protein (95aa)
Uncharacterized protein (Fragment) n=1 Tax=Escherichia coli O25b:H4-ST131 str. EC958 RepID=N1N6Q7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ45366.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_7_1_scaffold_780_trna_1
unknown

Not on your lists

22..95
DNA (74bp)
transferRNA
NECEvent2014_7_1_scaffold_780_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

261..1064
DNA (804bp) protein (268aa)
Aldo/keto reductase n=11 Tax=Escherichia coli RepID=B1IPV1_ECOLC rbh
dkgB; 2,5-diketo-D-gluconate reductase B rbh
2,5-diketo-D-gluconic acid reductase B {ECO:0000313|EMBL:EOV83027.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_7_1_scaffold_780_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1061..1975)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=59 Tax=Enterobacteriaceae RepID=B1IPV0_ECOLC rbh
yafC; DNA-binding transcriptional regulator rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EFJ97060.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_1_scaffold_780_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2237..3016
DNA (780bp) protein (260aa)
UPF0294 protein YafD n=2 Tax=Escherichia coli RepID=E9Z253_ECOLX rbh
yafD; hypothetical protein
UPF0294 protein YafD {ECO:0000256|HAMAP-Rule:MF_01119}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_780_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3020..3643
DNA (624bp) protein (208aa)
Methyltransferase, UbiE/COQ5 family n=36 Tax=Escherichia coli RepID=B3XF18_ECOLX rbh
Methyltransferase domain-containing protein {ECO:0000313|EMBL:EGB67708.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
methyltransferase type 11 rbh
NECEvent2014_7_1_scaffold_780_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3691..5049)
DNA (1359bp) protein (453aa)
Membrane-bound lytic murein transglycosylase D n=966 Tax=Enterobacteriaceae RepID=MLTD_ECOL6 rbh
mltD; membrane-bound lytic murein transglycosylase D
Membrane-bound lytic murein transglycosylase D (Murein hydrolase D) (Regulatory protein DniR) {ECO:0000313|EMBL:EGI47706.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Entero
NECEvent2014_7_1_scaffold_780_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5121..5876)
DNA (756bp) protein (252aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
Hydroxyacylglutathione hydrolase n=52 Tax=Escherichia coli RepID=J7QMA7_ECOLX rbh
gloB; Hydroxyacylglutathione hydrolase rbh
NECEvent2014_7_1_scaffold_780_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5910..6632
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=D3GS41_ECO44 rbh
putative methyltransferase
Methyltransferase domain protein {ECO:0000313|EMBL:EGI52330.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_1_scaffold_780_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6629..7096)
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=7 Tax=Enterobacteriaceae RepID=D2AIY9_SHIF2 rbh
ribonuclease HI RnhA
NECEvent2014_7_1_scaffold_780_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7152..7892
DNA (741bp) protein (247aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7) rbh
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EFJ86072.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFJ86072.1};; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
DNA polymerase III subunit epsilon n=1 Tax=Escherichia coli RepID=UPI0002B913D5 rbh
NECEvent2014_7_1_scaffold_780_trna_2
unknown

Not on your lists

8025..8098
DNA (74bp)
transferRNA
Displaying 12 items

View Taxonomy