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NECEvent2014_7_2_scaffold_4

Alias: 177_002_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_4_1
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..622
DNA (621bp) protein (207aa)
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS
Flap endonuclease Xni n=129 Tax=Bacteria RepID=XNI_KLEP3
endonuclease
NECEvent2014_7_2_scaffold_4_2
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(693..1841)
DNA (1149bp) protein (383aa)
L-1,2-propanediol oxidoreductase n=15 Tax=Klebsiella pneumoniae RepID=G0GTG7_KLEPN rbh
Lactaldehyde reductase
L-1,2-propanediol oxidoreductase {ECO:0000313|EMBL:EJK90286.1}; TaxID=1162296 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebs
NECEvent2014_7_2_scaffold_4_3
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1869..2516)
DNA (648bp) protein (216aa)
fuculose phosphate aldolase (EC:4.1.2.17)
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=272620 species
L-fuculose phosphate aldolase n=123 Tax=Bacteria RepID=A6TD81_KLEP7 rbh
NECEvent2014_7_2_scaffold_4_4
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3083..4393
DNA (1311bp) protein (437aa)
Fucose permease n=122 Tax=Bacteria RepID=G8VT93_KLEPH rbh
L-fucose transporter
FucP protein {ECO:0000313|EMBL:CEO81707.1}; FucP_1 protein {ECO:0000313|EMBL:CEN65889.1}; L-fucose permease {ECO:0000313|EMBL:AIT00136.1}; L-fucose transporter {ECO:0000313|EMBL:AKH00425.1}; TaxID=573
NECEvent2014_7_2_scaffold_4_5
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4426..6201
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SA
L-fucose isomerase n=2 Tax=Klebsiella pneumoniae RepID=V3FXY3_KLEPN rbh
fucI; L-fucose isomerase rbh
NECEvent2014_7_2_scaffold_4_6
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6309..7727
DNA (1419bp) protein (473aa)
fucK; L-fuculokinase (EC:2.7.1.51)
L-fuculokinase {ECO:0000313|EMBL:AKE74481.1}; EC=2.7.1.51 {ECO:0000313|EMBL:AKE74481.1};; TaxID=72407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kle
L-fuculokinase n=1 Tax=Klebsiella pneumoniae MGH 18 RepID=V3T5F4_KLEPN rbh
NECEvent2014_7_2_scaffold_4_7
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7729..8151
DNA (423bp) protein (141aa)
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAM
L-fucose mutarotase n=129 Tax=Bacteria RepID=G0GTH2_KLEPN
fucose operon protein
NECEvent2014_7_2_scaffold_4_8
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8210..8920
DNA (711bp) protein (237aa)
Positive regulator of the fuc operon n=49 Tax=Bacteria RepID=A6TD86_KLEP7 rbh
DNA-binding transcriptional activator FucR
Transcriptional regulator {ECO:0000313|EMBL:ERE44579.1}; TaxID=1357296 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EGD-AAK
NECEvent2014_7_2_scaffold_4_9
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8969..10069)
DNA (1101bp) protein (367aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rR
Ribosomal RNA large subunit methyltransferase M n=133 Tax=Bacteria RepID=G0GTH4_KLEPN rbh
23S rRNA methyltransferase
NECEvent2014_7_2_scaffold_4_10
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10062..10457)
DNA (396bp) protein (132aa)
Uncharacterized protein n=146 Tax=Bacteria RepID=D3RIN5_KLEVT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT00142.1}; YgdD protein {ECO:0000313|EMBL:CCI78400.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
NECEvent2014_7_2_scaffold_4_11
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10477..11394)
DNA (918bp) protein (306aa)
Positive regulator of gcv operon n=43 Tax=Enterobacteriaceae RepID=A6TD89_KLEP7 rbh
DNA-binding transcriptional activator GcvA
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADC56824.1}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="
NECEvent2014_7_2_scaffold_4_12
Klebsiella quasipneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11746..11976)
DNA (231bp) protein (77aa)
Uncharacterized protein n=148 Tax=Bacteria RepID=D3RIN3_KLEVT
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:CDN08101.1}; TaxID=1463164 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp.
NECEvent2014_7_2_scaffold_4_13
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12168..13373
DNA (1206bp) protein (402aa)
csdA; cysteine desulfurase, catalytic subunit CsdA (EC:2.8.1.7)
CsdA protein {ECO:0000313|EMBL:CDO12712.1}; EC=4.4.1.- {ECO:0000313|EMBL:CEO81698.1};; Cysteine sulfinate desulfinase {ECO:0000313|EMBL:AIT00145.1}; EC=4.4.1.- {ECO:0000313|EMBL:AIT00145.1};; TaxID=57
Cysteine sulfinate desulfinase n=28 Tax=Enterobacteriaceae RepID=G0GTH8_KLEPN rbh
NECEvent2014_7_2_scaffold_4_14
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13373..13804
DNA (432bp) protein (144aa)
Uncharacterized protein n=43 Tax=Bacteria RepID=G0GTH9_KLEPN
CsdA-binding activator
CsdE protein {ECO:0000313|EMBL:CEN65879.1}; Klebsiella pneumoniae str. Kp52.145, chromosome, complete genome {ECO:0000313|EMBL:CDO12711.1}; Klebsiella pneumoniae subsp. rhinoscleromatis strain SB3432,
NECEvent2014_7_2_scaffold_4_15
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13847..14668)
DNA (822bp) protein (274aa)
Sulfur acceptor protein CsdL n=14 Tax=Enterobacteriaceae RepID=G0GTI0_KLEPN rbh
ygdL; putative enzyme
ThiF family protein {ECO:0000313|EMBL:ESB01761.1}; TaxID=1269006 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumon
NECEvent2014_7_2_scaffold_4_16
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14756..15853)
DNA (1098bp) protein (366aa)
Membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:CDK76617.1}; EC=3.2.1.- {ECO:0000313|EMBL:CDK76617.1};; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobac
Membrane-bound lytic murein transglycosylase A n=137 Tax=Bacteria RepID=A6TD94_KLEP7 rbh
mltA; murein transglycosylase A
NECEvent2014_7_2_scaffold_4_trna_1
unknown

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16064..16137
DNA (74bp)
transferRNA
NECEvent2014_7_2_scaffold_4_17
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16212..17465)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=4 Tax=Cronobacter sakazakii RepID=A7MR24_CROS8 rbh
amiC; N-acetylmuramoyl-L-alanine amidase rbh
Uncharacterized protein {ECO:0000313|EMBL:ABU75789.1}; TaxID=290339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sa
NECEvent2014_7_2_scaffold_4_18
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17693..19024
DNA (1332bp) protein (444aa)
N-acetylglutamate synthase (EC:2.3.1.1) rbh
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}; TaxID=930780 species="Bacte
Amino-acid acetyltransferase n=4 Tax=Cronobacter sakazakii RepID=I2EF78_CROSK rbh
NECEvent2014_7_2_scaffold_4_19
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19061..20896)
DNA (1836bp) protein (612aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD sub
recD; exonuclease V subunit alpha (EC:3.1.11.5) rbh
Exonuclease V subunit alpha n=2 Tax=Cronobacter sakazakii RepID=M1ISN7_CROSK rbh
NECEvent2014_7_2_scaffold_4_20
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20893..24435)
DNA (3543bp) protein (1181aa)
recB; exonuclease V subunit beta (EC:3.1.11.5) rbh
Exonuclease V subunit beta n=1 Tax=Cronobacter sakazakii SP291 RepID=M1JBL4_CROSK rbh
Exodeoxyribonuclease V subunit beta {ECO:0000313|EMBL:AKE94704.1}; TaxID=28141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cro
NECEvent2014_7_2_scaffold_4_21
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24432..27320)
DNA (2889bp) protein (963aa)
Putative protease 3 n=1 Tax=Cronobacter sakazakii ES15 RepID=I2EF75_CROSK rbh
Protease3 {ECO:0000313|EMBL:EGL73480.1}; TaxID=930780 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii E899.;
ptr; protease 3 rbh
NECEvent2014_7_2_scaffold_4_22
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27426..30797)
DNA (3372bp) protein (1124aa)
recC; exonuclease V subunit gamma (EC:3.1.11.5) rbh
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub
Exonuclease V subunit gamma n=3 Tax=Cronobacter sakazakii RepID=M1JRZ0_CROSK rbh
NECEvent2014_7_2_scaffold_4_23
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30810..31142)
DNA (333bp) protein (111aa)
Uncharacterized protein n=5 Tax=Cronobacter sakazakii RepID=M1JFN8_CROSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK03718.1}; TaxID=1208663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter s
NECEvent2014_7_2_scaffold_4_24
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31127..31549)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Cronobacter sakazakii RepID=A7MR34_CROS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU75780.1}; TaxID=290339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sa
NECEvent2014_7_2_scaffold_4_25
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31546..32109)
DNA (564bp) protein (188aa)
Uncharacterized protein n=3 Tax=Cronobacter sakazakii RepID=M1JBL0_CROSK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EGL73476.1}; TaxID=930780 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sa
NECEvent2014_7_2_scaffold_4_26
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32100..32573)
DNA (474bp) protein (158aa)
Uncharacterized protein n=3 Tax=Cronobacter sakazakii RepID=M1JFE4_CROSK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EGL73475.1}; TaxID=930780 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sa
NECEvent2014_7_2_scaffold_4_27
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32754..33548)
DNA (795bp) protein (265aa)
thyA; thymidylate synthase (EC:2.1.1.45) rbh
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
Thymidylate synthase n=3 Tax=Cronobacter sakazakii RepID=M1JRY7_CROSK rbh
NECEvent2014_7_2_scaffold_4_28
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33555..34430)
DNA (876bp) protein (292aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1208664
Prolipoprotein diacylglyceryl transferase n=6 Tax=Cronobacter sakazakii RepID=LGT_CROS8 rbh
prolipoprotein diacylglyceryl transferase rbh
NECEvent2014_7_2_scaffold_4_29
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34595..36841)
DNA (2247bp) protein (749aa)
Fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein n=4 Tax=Cronobacter sakazakii RepID=I2EF67_CROSK rbh
phosphoenolpyruvate-protein phosphotransferase rbh
FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated {ECO:0000313|EMBL:CCK08302.1}; TaxID=1208664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacter
Displaying items 1-30 of 163 in total

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