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NECEvent2014_7_2_scaffold_146

Alias: 177_002_scaffold_146

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_146_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..78
DNA (78bp) protein (26aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2861200 RepID=M8V1R6_ECOLX
insB-11; IS1 protein InsA
Insertion element IS1 protein insB {ECO:0000313|EMBL:EOU83632.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_7_2_scaffold_146_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(72..1043)
DNA (972bp) protein (324aa)
Lipopolysaccharide heptosyltransferase I {ECO:0000313|EMBL:EZJ68507.1}; EC=2.4.-.- {ECO:0000313|EMBL:EZJ68507.1};; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
Lipopolysaccharide heptosyltransferase 1 n=1 Tax=Escherichia coli UMEA 3052-1 RepID=T8N455_ECOLX rbh
rfaC; lipopolysaccharide heptosyltransferase RfaC rbh
NECEvent2014_7_2_scaffold_146_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1047..2093)
DNA (1047bp) protein (349aa)
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:EZJ88949.1}; EC=2.4.-.- {ECO:0000313|EMBL:EZJ88949.1};; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteria
ADP-heptose--LPS heptosyltransferase (EC:2.-.-.-)
Lipopolysaccharide heptosyltransferase II n=17 Tax=Escherichia coli RepID=N2FL89_ECOLX rbh
NECEvent2014_7_2_scaffold_146_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2103..3035)
DNA (933bp) protein (311aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055236};; ADP-L-glycero
ADP-L-glycero-D-manno-heptose-6-epimerase n=497 Tax=Enterobacteriaceae RepID=HLDD_ECO24 rbh
rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase
NECEvent2014_7_2_scaffold_146_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3249..4445
DNA (1197bp) protein (399aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
2-amino-3-ketobutyrate coenzyme A ligase n=727 Tax=Enterobacteriaceae RepID=KBL_ECO57 rbh
kbl; 2-amino-3-ketobutyrate CoA ligase
NECEvent2014_7_2_scaffold_146_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4455..5480
DNA (1026bp) protein (342aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1446704 species="Bac
L-threonine 3-dehydrogenase n=568 Tax=Enterobacteriaceae RepID=TDH_ECO55 rbh
L-threonine 3-dehydrogenase
NECEvent2014_7_2_scaffold_146_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5719..6753
DNA (1035bp) protein (345aa)
Glycosyl transferase 2 family protein n=5 Tax=Escherichia coli RepID=N2HSB0_ECOLX rbh
hypothetical protein rbh
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EZJ68502.1}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_7_2_scaffold_146_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6740..7699)
DNA (960bp) protein (320aa)
Divergent polysaccharide deacetylase family protein n=1 Tax=Escherichia coli 174750 RepID=M9EFD7_ECOLX rbh
Divergent polysaccharide deacetylase family protein {ECO:0000313|EMBL:EMW91927.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
polysaccharide deacetylase
NECEvent2014_7_2_scaffold_146_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7703..8962)
DNA (1260bp) protein (420aa)
Murein hydrolase activator EnvC n=647 Tax=Enterobacteriaceae RepID=ENVC_ECOLI rbh
hypothetical protein
Murein hydrolase activator EnvC {ECO:0000313|EMBL:KDY60107.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_2_scaffold_146_10
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8996..10540)
DNA (1545bp) protein (515aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=Escherichia coli RepID=U9XS72_ECOLX rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
NECEvent2014_7_2_scaffold_146_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10785..11216
DNA (432bp) protein (144aa)
Uncharacterized protein YibN n=1279 Tax=Enterobacteriaceae RepID=YIBN_ECO57
yibN; hypothetical protein
Putative Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:EGI19337.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_7_2_scaffold_146_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11358..11609
DNA (252bp) protein (84aa)
Glutaredoxin-3 n=1352 Tax=Enterobacteriaceae RepID=GLRX3_ECO57
grxC; glutaredoxin
Glutaredoxin-3 {ECO:0000313|EMBL:EHP63696.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_4
NECEvent2014_7_2_scaffold_146_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11672..12139
DNA (468bp) protein (156aa)
Protein-export protein SecB n=433 Tax=Enterobacteriaceae RepID=SECB_ECO27 rbh
preprotein translocase subunit SecB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_2_scaffold_146_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12139..13158
DNA (1020bp) protein (340aa)
gpsA; glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1273 Tax=Enterobacteriaceae RepID=GPDA_ECO24 rbh
NECEvent2014_7_2_scaffold_146_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13238..14059
DNA (822bp) protein (274aa)
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase {ECO:0000313|EMBL:KDY98054.1}; EC=2.3.1.30 {ECO:0000313|EMBL:KDY98054.1};; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac
Serine acetyltransferase n=1372 Tax=Enterobacteriaceae RepID=CYSE_ECO57 rbh
NECEvent2014_7_2_scaffold_146_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14112..14585)
DNA (474bp) protein (158aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R
tRNA (cytidine(34)-2'-O)-methyltransferase n=87 Tax=Enterobacteriaceae RepID=J7QXA7_ECOLX rbh
yibK; tRNA/rRNA methyltransferase YibK rbh
NECEvent2014_7_2_scaffold_146_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14771..15961)
DNA (1191bp) protein (397aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019080}; EC=1.1.-.- {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019079};; TaxID=1116136 species="Bacteria;
L-lactate dehydrogenase [cytochrome] n=306 Tax=Enterobacteriaceae RepID=LLDD_ECOBW rbh
lldD; L-lactate dehydrogenase rbh
NECEvent2014_7_2_scaffold_146_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15958..16734)
DNA (777bp) protein (259aa)
Putative L-lactate dehydrogenase operon regulatory protein n=411 Tax=Enterobacteriaceae RepID=LLDR_ECOLI rbh
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EZJ88933.1}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
lldR; DNA-binding transcriptional repressor
NECEvent2014_7_2_scaffold_146_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16734..18389)
DNA (1656bp) protein (552aa)
L-lactate permease n=4 Tax=Escherichia RepID=G7R3B4_ECOC2 rbh
L-lactate permease {ECO:0000313|EMBL:AFJ31274.1}; TaxID=741093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli Xu
L-lactate permease
NECEvent2014_7_2_scaffold_146_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18816..23444)
DNA (4629bp) protein (1543aa)
Putative inner membrane protein n=1 Tax=Escherichia coli DEC5A RepID=H4S7Z6_ECOLX rbh
adhesin
Putative adhesin {ECO:0000313|EMBL:ADD58810.1}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:
NECEvent2014_7_2_scaffold_146_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23488..24171)
DNA (684bp) protein (228aa)
Uncharacterized protein n=62 Tax=Escherichia coli RepID=D7ZTM7_ECOLX rbh
inner membrane lipoprotein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESK17787.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_146_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24715..25077)
DNA (363bp) protein (121aa)
Uncharacterized protein n=122 Tax=Escherichia coli RepID=B2N760_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKJ81168.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_146_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25362..25571
DNA (210bp) protein (70aa)
Uncharacterized protein YibT n=995 Tax=Enterobacteriaceae RepID=YIBT_ECO57
putative cytoplasmic protein
Uncharacterized protein {ECO:0000313|EMBL:KDV40770.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_146_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25583..26170)
DNA (588bp) protein (196aa)
Repressor for mtl n=584 Tax=Enterobacteriaceae RepID=C3SMS7_ECOLX rbh
mtlR; mannitol repressor protein
Mannitol operon repressor {ECO:0000313|EMBL:AJE58166.1}; Repressor for mtl {ECO:0000313|EMBL:ACI75771.1}; Strain O157 SvETEC scaffold40.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ44739.1};
NECEvent2014_7_2_scaffold_146_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26170..27318)
DNA (1149bp) protein (383aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1269007 spec
Mannitol-1-phosphate 5-dehydrogenase n=34 Tax=Escherichia coli RepID=MTLD_ECOLC rbh
mtlD; Mannitol-1-phosphate dehydrogenase
NECEvent2014_7_2_scaffold_146_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27548..29461)
DNA (1914bp) protein (638aa)
PTS system, mannitol-specific IIC component {ECO:0000313|EMBL:EII36931.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EII36931.1};; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacter
PTS system, mannitol-specific enzyme IIABC components n=130 Tax=Enterobacteriaceae RepID=J7QXA1_ECOLX rbh
mtlA; PTS system mannitol-specific transporter subunit IICBA rbh
NECEvent2014_7_2_scaffold_146_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29998..30360
DNA (363bp) protein (121aa)
Uncharacterized protein n=189 Tax=Enterobacteriaceae RepID=C3SMT7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZA34268.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_146_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30363..31499
DNA (1137bp) protein (379aa)
Inner membrane protein YibH n=722 Tax=Enterobacteriaceae RepID=YIBH_ECO57 rbh
yibH; hypothetical protein
Auxiliary transport protein, membrane fusion protein (MFP) family protein {ECO:0000313|EMBL:EFU33951.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterob
NECEvent2014_7_2_scaffold_146_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33103..33564)
DNA (462bp) protein (154aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=S1EVA6_ECOLX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV74600.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_146_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33576..34370)
DNA (795bp) protein (265aa)
RHS repeat-associated core domain protein n=7 Tax=Escherichia coli RepID=N2EFN4_ECOLX
putative truncated Rhs core protein
Protein rhsC {ECO:0000313|EMBL:EOW01918.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.
Displaying 30 items

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