ggKbase home page

NECEvent2014_7_2_scaffold_180

Alias: 177_002_scaffold_180

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_180_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..501)
DNA (501bp) protein (167aa)
Uncharacterized protein n=38 Tax=Escherichia coli RepID=J7R374_ECOLX
ycdT; putative diguanylate cyclase
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFK69952.1}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_7_2_scaffold_180_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1088..3511
DNA (2424bp) protein (808aa)
Poly-beta-1,6-N-acetyl-D-glucosamine export protein n=303 Tax=Enterobacteriaceae RepID=PGAA_ECO57 rbh
pgaA; Biofilm PGA synthesis protein pgaA precursor rbh
Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:KDV64764.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_7_2_scaffold_180_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3520..5538
DNA (2019bp) protein (673aa)
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase n=304 Tax=Enterobacteriaceae RepID=PGAB_ECOLI rbh
pgaB; outer membrane N-deacetylase
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB {ECO:0000313|EMBL:ESE13071.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
NECEvent2014_7_2_scaffold_180_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5531..6856
DNA (1326bp) protein (442aa)
Poly-beta-1,6-N-acetyl-D-glucosamine synthase n=356 Tax=Enterobacteriaceae RepID=PGAC_ECOLI rbh
N-glycosyltransferase
Biofilm PGA synthesis N-glycosyltransferase PgaC {ECO:0000313|EMBL:EGI10577.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_7_2_scaffold_180_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6858..7271
DNA (414bp) protein (138aa)
Biofilm PGA synthesis protein PgaD n=733 Tax=Enterobacteriaceae RepID=PGAD_ECO57
putative PGA biosynthesis protein
PgaD protein {ECO:0000313|EMBL:CAU96993.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain
NECEvent2014_7_2_scaffold_180_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7321..8385)
DNA (1065bp) protein (355aa)
Protein PhoH n=622 Tax=Enterobacteriaceae RepID=PHOH_ECO57 rbh
protein PhoH (phosphate starvation-inducible protein)
PhoH protein {ECO:0000313|EMBL:EDU63128.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
NECEvent2014_7_2_scaffold_180_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8730..10001)
DNA (1272bp) protein (424aa)
Deferrochelatase/peroxidase EfeB n=126 Tax=Escherichia RepID=EFEB_ECOLI rbh
efeB; Peroxidase ycdB precursor
Deferrrochelatase, periplasmic {ECO:0000313|EMBL:AKF54919.1}; Dyp-type peroxidase family {ECO:0000313|EMBL:CDP71999.1}; Peroxidase {ECO:0000313|EMBL:AJB51166.1}; Peroxidase ycdB {ECO:0000313|EMBL:CEE0
NECEvent2014_7_2_scaffold_180_8
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10007..11134)
DNA (1128bp) protein (376aa)
Iron uptake system component EfeO n=189 Tax=Enterobacteriaceae RepID=EFEO_ECOLI rbh
efeO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EID61559.1}; TaxID=1086030 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexner
NECEvent2014_7_2_scaffold_180_9
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11192..12022)
DNA (831bp) protein (277aa)
Ferrous iron permease n=17 Tax=Enterobacteriaceae RepID=B7LFC6_ECO55 rbh
FTR1 family protein
Ferrous iron transport permease EfeU {ECO:0000313|EMBL:EFW51646.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shig
NECEvent2014_7_2_scaffold_180_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12564..14072)
DNA (1509bp) protein (503aa)
Sodium/proline symporter n=24 Tax=Escherichia coli RepID=A7ZYX1_ECOHS rbh
sodium/proline symporter
Sodium/proline symporter {ECO:0000313|EMBL:EOV80797.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_2_scaffold_180_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14495..18457
DNA (3963bp) protein (1321aa)
Bifunctional protein PutA n=6 Tax=Escherichia coli RepID=A7ZYW9_ECOHS rbh
putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase rbh
PutA protein {ECO:0000313|EMBL:EQY66795.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 32
NECEvent2014_7_2_scaffold_180_12
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18497..19135)
DNA (639bp) protein (213aa)
Transcriptional regulator RutR n=34 Tax=Escherichia coli RepID=A7ZYW8_ECOHS rbh
ycdC; putative DNA-binding transcriptional regulator
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) {ECO:0000313|EMBL:CDK70861.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
NECEvent2014_7_2_scaffold_180_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19423..20514
DNA (1092bp) protein (364aa)
Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214}; EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};; TaxID=1444191 species="
Pyrimidine monooxygenase RutA n=1 Tax=Escherichia coli H591 RepID=F4VD43_ECOLX rbh
hypothetical protein rbh
NECEvent2014_7_2_scaffold_180_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20511..21206
DNA (696bp) protein (232aa)
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB {ECO:0000255|HAMAP-Rule:MF_00830}; EC=3.5.1.110 {ECO:0000255|HAMAP-Rule:MF_00830};; Ureidoacrylate amidohydrolase {ECO:0000255|HAMAP-Rule:MF_008
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB n=256 Tax=Enterobacteriaceae RepID=RUTB_SHISS rbh
hypothetical protein
NECEvent2014_7_2_scaffold_180_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21218..21604
DNA (387bp) protein (129aa)
Putative aminoacrylate peracid reductase RutC {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023348}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023353};; TaxID=1444
Putative aminoacrylate peracid reductase RutC n=10 Tax=Escherichia coli RepID=T7XDS3_ECOLX
rutC; pyrimidine utilization protein C
NECEvent2014_7_2_scaffold_180_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21612..22412
DNA (801bp) protein (267aa)
Putative aminoacrylate hydrolase RutD {ECO:0000255|HAMAP-Rule:MF_00832}; EC=3.5.1.- {ECO:0000255|HAMAP-Rule:MF_00832};; Aminohydrolase {ECO:0000255|HAMAP-Rule:MF_00832}; TaxID=331112 species="Bacteria
Putative aminoacrylate hydrolase RutD n=10 Tax=Escherichia coli RepID=RUTD_ECOHS rbh
alpha/beta hydrolase fold protein
NECEvent2014_7_2_scaffold_180_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22422..23012
DNA (591bp) protein (197aa)
Probable malonic semialdehyde reductase RutE {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.1.1.298 {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; E
Probable malonic semialdehyde reductase RutE n=248 Tax=Escherichia coli RepID=RUTE_ECO57 rbh
hypothetical protein
NECEvent2014_7_2_scaffold_180_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23023..23517
DNA (495bp) protein (165aa)
FMN reductase (NADH) RutF {ECO:0000256|HAMAP-Rule:MF_00833}; EC=1.5.1.42 {ECO:0000256|HAMAP-Rule:MF_00833};; FMN reductase {ECO:0000256|HAMAP-Rule:MF_00833}; NADH-flavin reductase RutF {ECO:0000256|HA
FMN reductase (NADH) RutF n=2 Tax=Enterobacteriaceae RepID=F4NDK4_9ENTR rbh
flavin reductase domain protein FMN-binding rbh
NECEvent2014_7_2_scaffold_180_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23538..24866
DNA (1329bp) protein (443aa)
Uracil-xanthine permease n=6 Tax=Escherichia coli RepID=B1IV91_ECOLC rbh
uracil-xanthine permease rbh
Pyrimidine permease {ECO:0000313|EMBL:KHI88953.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_7_2_scaffold_180_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25124..25297)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3490-1 RepID=T9LX63_ECOLX
ymdF; hypothetical protein
Putative cytoplasmic protein {ECO:0000313|EMBL:EGI22367.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_2_scaffold_180_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25670..26266
DNA (597bp) protein (199aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidored
NAD(P)H dehydrogenase (quinone) n=1031 Tax=Enterobacteriaceae RepID=NQOR_ECO24 rbh
wrbA; NAD(P)H:quinone oxidoreductase
NECEvent2014_7_2_scaffold_180_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26287..26514
DNA (228bp) protein (76aa)
Uncharacterized protein YccJ n=1422 Tax=Enterobacteriaceae RepID=YCCJ_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK20823.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_180_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26734..27975)
DNA (1242bp) protein (414aa)
glucose-1-phosphatase/inositol phosphatase (EC:3.1.3.10) rbh
Glucose-1-phosphatase n=2 Tax=Escherichia coli RepID=M8XX63_ECOLX rbh
Glucose-1-phosphatase {ECO:0000313|EMBL:EOV80783.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_7_2_scaffold_180_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28257..28655)
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=S1F269_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV80782.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Displaying 24 items

View Taxonomy