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NECEvent2014_7_2_scaffold_221

Alias: 177_002_scaffold_221

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_221_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72..206)
DNA (135bp) protein (45aa)
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:END90528.1}; EC=3.1.-.- {ECO:0000313|EMBL:END90528.1};; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
CRISPR-associated endonuclease Cas3-HD n=1 Tax=Escherichia coli P0301867.11 RepID=N3EZA2_ECOLX
cas3; CRISPR-associated helicase Cas3
NECEvent2014_7_2_scaffold_221_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(565..1299)
DNA (735bp) protein (245aa)
phosphoadenosine phosphosulfate reductase (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000256|SAAS:SAAS00055482}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000256|SAAS:SAAS00089161};; 3'-phosphoaden
Phosphoadenosine phosphosulfate reductase n=289 Tax=Escherichia RepID=CYSH_ECO27 rbh
NECEvent2014_7_2_scaffold_221_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1373..3085)
DNA (1713bp) protein (571aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO
cysI; sulfite reductase subunit beta (EC:1.8.1.2)
Sulfite reductase [NADPH] hemoprotein beta-component n=749 Tax=Enterobacteriaceae RepID=CYSI_ECO24 rbh
NECEvent2014_7_2_scaffold_221_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3085..4884)
DNA (1800bp) protein (600aa)
Sulfite reductase [NADPH] flavoprotein alpha-component n=90 Tax=Escherichia RepID=B2N0Q3_ECOLX rbh
cysJ; Sulfite reductase [NADPH] flavoprotein, alpha-component
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|HAMAP-Rule:MF_01541, ECO:0000256|PIRNR:PIRNR000207}; Short=SiR-FP {ECO:0000256|HAMAP-Rule:MF_01541, ECO:0000256|PIRNR:PIRNR000207};;
NECEvent2014_7_2_scaffold_221_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5200..5565
DNA (366bp) protein (122aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enteroba
6-carboxy-5,6,7,8-tetrahydropterin synthase n=916 Tax=Enterobacteriaceae RepID=QUED_ECO57
ygcM; 6-pyruvoyl tetrahydrobiopterin synthase
NECEvent2014_7_2_scaffold_221_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5643..6914
DNA (1272bp) protein (424aa)
Pyridine nucleotide-disulphide oxidoreductase family protein n=24 Tax=Escherichia coli RepID=B2N0Q1_ECOLX rbh
electron transfer flavoprotein-quinone oxidoreductase YgcN
Oxidoreductase with FAD/NAD(P)-binding domain-containing protein {ECO:0000313|EMBL:ELC15011.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
NECEvent2014_7_2_scaffold_221_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6905..7165
DNA (261bp) protein (87aa)
Predicted 4Fe-4S cluster-containing protein n=85 Tax=Escherichia coli RepID=C6EJA5_ECOBD
ferredoxin-like protein
Ferredoxin-like protein ygcO {ECO:0000313|EMBL:EOW16746.1}; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_7_2_scaffold_221_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7182..7757
DNA (576bp) protein (192aa)
Uncharacterized protein YgcP n=769 Tax=Enterobacteriaceae RepID=YGCP_ECOLI rbh
glycerol-3-phosphate responsive antiterminator, GlpP
Uncharacterized protein {ECO:0000313|EMBL:KDZ36507.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_221_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7905..8765)
DNA (861bp) protein (287aa)
Putative electron transfer flavoprotein subunit YgcQ n=322 Tax=Enterobacteriaceae RepID=YGCQ_ECOLI rbh
electron transfer flavoprotein subunit alpha
Electron transfer flavoFAD-binding domain protein {ECO:0000313|EMBL:EHX24515.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_7_2_scaffold_221_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8762..9541)
DNA (780bp) protein (260aa)
Putative electron transfer flavoprotein subunit YgcR n=301 Tax=Enterobacteriaceae RepID=YGCR_ECOLI rbh
ygcR; Putative electron transfer flavoprotein subunit ygcR
Electron transfer flavoprotein {ECO:0000313|EMBL:ESD21962.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_7_2_scaffold_221_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9519..10214)
DNA (696bp) protein (232aa)
Putative membrane protein n=2 Tax=Escherichia coli RepID=H5GVR2_ECOLX rbh
transporter
Inner membrane metabolite transporter ygcS {ECO:0000313|EMBL:EOV56086.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_7_2_scaffold_221_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10242..10928)
DNA (687bp) protein (229aa)
Inner membrane metabolite transporter ygcS n=1 Tax=Escherichia coli KTE108 RepID=S1HLK6_ECOLX rbh
major facilitator superfamily protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:ESA86336.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_7_2_scaffold_221_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10950..12404)
DNA (1455bp) protein (485aa)
Alkylglycerone-phosphate synthase (EC:2.5.1.26)
Uncharacterized FAD-linked oxidoreductase YgcU n=142 Tax=Escherichia RepID=YGCU_ECOLI rbh
FAD linked oxidase, C-terminal domain protein {ECO:0000313|EMBL:ENB26685.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_7_2_scaffold_221_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12474..13259)
DNA (786bp) protein (262aa)
Uncharacterized protein n=336 Tax=Enterobacteriaceae RepID=H9UW18_ECOLX rbh
short chain dehydrogenase/reductase oxidoreductase
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KEO08767.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_7_2_scaffold_221_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13577..14854
DNA (1278bp) protein (426aa)
Inner membrane protein YqcE n=131 Tax=Enterobacteriaceae RepID=YQCE_ECOLI rbh
major facilitator superfamily protein
Inner membrane protein YqcE {ECO:0000313|EMBL:CDK82109.1}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_2_scaffold_221_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14881..16359
DNA (1479bp) protein (493aa)
Uncharacterized sugar kinase YgcE n=146 Tax=Enterobacteriaceae RepID=YGCE_ECOLI rbh
hypothetical protein
Kinase {ECO:0000313|EMBL:EQY18015.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;
NECEvent2014_7_2_scaffold_221_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18465..19136)
DNA (672bp) protein (224aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=650 Tax=Enterobacteriaceae RepID=QUEE_ECO57 rbh
ygcF; hypothetical protein rbh
NECEvent2014_7_2_scaffold_221_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19275..19415
DNA (141bp) protein (47aa)
Uncharacterized protein YqcG n=127 Tax=Escherichia RepID=YQCG_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDX20865.1}; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_221_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19429..20301
DNA (873bp) protein (291aa)
UPF0603 protein YgcG n=138 Tax=Escherichia RepID=YGCG_ECOLI rbh
hypothetical protein
UPF0603 protein YgcG {ECO:0000313|EMBL:AKA91829.1}; TaxID=941323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_7_2_scaffold_221_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20361..21659)
DNA (1299bp) protein (433aa)
eno; enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=2 Tax=Shigella sonnei RepID=ENO_SHISS rbh
NECEvent2014_7_2_scaffold_221_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21747..23369)
DNA (1623bp) protein (541aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
CTP synthase n=1284 Tax=Enterobacteriaceae RepID=PYRG_ECO24 rbh
Displaying 21 items

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