ggKbase home page

NECEvent2014_7_2_scaffold_232

Alias: 177_002_scaffold_232

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_232_trna_1
unknown

Not on your lists

7..88
DNA (82bp)
transferRNA
NECEvent2014_7_2_scaffold_232_trna_2
unknown

Not on your lists

115..186
DNA (72bp)
transferRNA
NECEvent2014_7_2_scaffold_232_trna_3
unknown

Not on your lists

224..295
DNA (72bp)
transferRNA
NECEvent2014_7_2_scaffold_232_trna_4
unknown

Not on your lists

314..387
DNA (74bp)
transferRNA
NECEvent2014_7_2_scaffold_232_trna_5
unknown

Not on your lists

438..509
DNA (72bp)
transferRNA
NECEvent2014_7_2_scaffold_232_trna_6
unknown

Not on your lists

550..621
DNA (72bp)
transferRNA
NECEvent2014_7_2_scaffold_232_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(778..1953)
DNA (1176bp) protein (392aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000313|EMBL:ENB15613.1}; EC=1.14.13.- {ECO:0000313|EMBL:ENB15613.1};; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobact
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=157 Tax=Escherichia RepID=UBIF_ECOLI rbh
UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase
NECEvent2014_7_2_scaffold_232_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2099..3523
DNA (1425bp) protein (475aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=950 Tax=Enterobacteriaceae RepID=MIAB_ECO24 rbh
tRNA-i(6)A37 thiotransferase enzyme MiaB
NECEvent2014_7_2_scaffold_232_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3637..4716
DNA (1080bp) protein (360aa)
PhoH-like protein n=674 Tax=Enterobacteriaceae RepID=C3TJ62_ECOLX rbh
PhoH family protein
PhoH-like protein {ECO:0000313|EMBL:EOV82401.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KT
NECEvent2014_7_2_scaffold_232_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4713..5180
DNA (468bp) protein (156aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=868172 species="Bacteria; Pr
Endoribonuclease YbeY n=716 Tax=Enterobacteriaceae RepID=YBEY_ECO24 rbh
hypothetical protein
NECEvent2014_7_2_scaffold_232_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5270..6148
DNA (879bp) protein (293aa)
Magnesium and cobalt efflux protein CorC n=1409 Tax=Enterobacteriaceae RepID=CORC_ECO57 rbh
ybeX; magnesium/cobalt efflux protein CorC
Magnesium and cobalt efflux protein CorC {ECO:0000313|EMBL:EQQ15519.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_7_2_scaffold_232_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6173..7711
DNA (1539bp) protein (513aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF
Apolipoprotein N-acyltransferase n=16 Tax=Escherichia coli RepID=A7ZXS6_ECOHS rbh
int; apolipoprotein N-acyltransferase rbh
NECEvent2014_7_2_scaffold_232_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7838..9715)
DNA (1878bp) protein (626aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) RepID=B1IYF2_ECOLC rbh
Rhomboid family protein {ECO:0000313|EMBL:EZK03445.1}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein rbh
NECEvent2014_7_2_scaffold_232_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10170..11078
DNA (909bp) protein (303aa)
Extracellular solute-binding protein family 3 n=28 Tax=Escherichia coli RepID=B1IYF3_ECOLC rbh
gltI; glutamate/aspartate periplasmic-binding protein GltI rbh
Glutamate/aspartate periplasmic-binding protein {ECO:0000313|EMBL:ESK11969.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_7_2_scaffold_232_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11248..11988
DNA (741bp) protein (247aa)
Putative ATP synthase F0, A subunit (Fragment) n=2 Tax=Escherichia coli RepID=E5ZUS0_ECOLX rbh
glutamate/aspartate ABC transporter permease component
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EFJ79686.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_7_2_scaffold_232_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11988..12662
DNA (675bp) protein (225aa)
Glutamate/aspartate transport system permease {ECO:0000313|EMBL:EKI54960.1}; EC=3.6.3.21 {ECO:0000313|EMBL:EKI54960.1};; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobac
Glutamate/aspartate ABC transporter, permease protein GltK n=56 Tax=Enterobacteriaceae RepID=A7ZXS2_ECOHS rbh
GltK rbh
NECEvent2014_7_2_scaffold_232_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12662..13387
DNA (726bp) protein (242aa)
Glutamate/aspartate transport ATP-binding protein GltL n=944 Tax=Enterobacteriaceae RepID=GLTL_ECO57 rbh
gltL; Glutamate/aspartate transport ATP-binding protein gltL
Glutamate/aspartate transport ATP-binding protein gltL {ECO:0000313|EMBL:EFU97043.1}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
NECEvent2014_7_2_scaffold_232_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13505..14440
DNA (936bp) protein (312aa)
rihA; ribonucleoside hydrolase 1 (EC:3.2.2.1) rbh
Pyrimidine-specific ribonucleoside hydrolase RihA {ECO:0000256|HAMAP-Rule:MF_01431, ECO:0000256|SAAS:SAAS00014539}; EC=3.2.-.- {ECO:0000256|HAMAP-Rule:MF_01431, ECO:0000256|SAAS:SAAS00015510};; Cytidi
Pyrimidine-specific ribonucleoside hydrolase RihA n=26 Tax=Escherichia coli RepID=RIHA_ECOLC rbh
NECEvent2014_7_2_scaffold_232_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14524..16194
DNA (1671bp) protein (557aa)
Chaperone protein HscC n=94 Tax=Gammaproteobacteria RepID=HSCC_ECOLI rbh
hscC; Chaperone protein hscC
Chaperone protein DnaK {ECO:0000313|EMBL:CDK81441.1}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_232_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16254..17705)
DNA (1452bp) protein (484aa)
Uncharacterized J domain-containing protein DjlC n=129 Tax=Enterobacteriaceae RepID=DJLC_ECOLI rbh
heat shock protein DnaJ domain-containing protein
DnaJ domain protein {ECO:0000313|EMBL:KDZ37250.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_7_2_scaffold_232_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17702..18409)
DNA (708bp) protein (236aa)
Uncharacterized protein YbeU n=126 Tax=Escherichia RepID=YBEU_ECOLI rbh
ybeU; tRNA ligase
GybeU {ECO:0000313|EMBL:EGB67317.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
NECEvent2014_7_2_scaffold_232_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18511..19065
DNA (555bp) protein (185aa)
Sel1 domain protein repeat-containing protein n=320 Tax=Enterobacteriaceae RepID=B1IYG1_ECOLC rbh
ybeT; hypothetical protein rbh
Sel1 repeat family protein {ECO:0000313|EMBL:ENB30622.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_7_2_scaffold_232_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19075..20502)
DNA (1428bp) protein (476aa)
DnaJ domain protein n=14 Tax=Escherichia coli RepID=B2N7W0_ECOLX rbh
DnaJ domain protein {ECO:0000313|EMBL:EDU63903.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5
heat shock protein DnaJ domain-containing protein rbh
NECEvent2014_7_2_scaffold_232_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20499..21206)
DNA (708bp) protein (236aa)
Uncharacterized protein YbeR n=174 Tax=Escherichia RepID=YBER_ECOLI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDY97021.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_232_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21370..21948
DNA (579bp) protein (193aa)
Uncharacterized protein YbeQ n=165 Tax=Enterobacteriaceae RepID=YBEQ_ECOLI rbh
hypothetical protein
Sel1 repeat protein {ECO:0000313|EMBL:EID66389.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
Displaying 25 items

View Taxonomy