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NECEvent2014_7_2_scaffold_253

Alias: 177_002_scaffold_253

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_253_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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331..744
DNA (414bp) protein (138aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1042 Tax=Enterobacteriaceae RepID=MSRB_ECO24
yeaA; methionine sulfoxide reductase B
NECEvent2014_7_2_scaffold_253_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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786..1058
DNA (273bp) protein (91aa)
Uncharacterized protein YeaC n=95 Tax=Escherichia RepID=YEAC_ECOLI
yeaC; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ64506.1}; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_253_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1428..2504
DNA (1077bp) protein (359aa)
Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjL n=122 Tax=Enterobacteriaceae RepID=YDJL_ECOLI rbh
ydjL; predicted oxidoreductase, Zn-dependent and NAD(P)-binding
Putative oxidoreductase {ECO:0000313|EMBL:EGI11398.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_253_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2531..3910
DNA (1380bp) protein (460aa)
Major facilitator family transporter n=112 Tax=Escherichia coli RepID=A7ZMP5_ECO24 rbh
ydjK; transporter rbh
YdjK protein {ECO:0000313|EMBL:CAU97803.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain
NECEvent2014_7_2_scaffold_253_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3927..4970
DNA (1044bp) protein (348aa)
Zinc-binding dehydrogenase n=25 Tax=Escherichia coli RepID=E9WFH9_ECOLX rbh
putative zinc-binding dehydrogenase
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:KDY20898.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_7_2_scaffold_253_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4991..5827
DNA (837bp) protein (279aa)
Fructose-bisphosphate aldolase, class II n=118 Tax=Escherichia RepID=B2N2N4_ECOLX rbh
putative sugar-bisphosphate aldolase rbh
Ketose-bisphosphate aldolase family protein {ECO:0000313|EMBL:KEN48794.1}; TaxID=1444091 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_7_2_scaffold_253_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5832..6779
DNA (948bp) protein (316aa)
Kinase, PfkB family n=58 Tax=Escherichia coli RepID=B2N2N3_ECOLX rbh
putative sugar kinase
PfkB domain protein {ECO:0000313|EMBL:CDP71192.1}; Strain O157 SvETEC scaffold4.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ47661.1}; Sugar kinase {ECO:0000313|EMBL:AKF20759.1}; TaxID=562 sp
NECEvent2014_7_2_scaffold_253_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6789..7769
DNA (981bp) protein (327aa)
Oxidoreductase, aldo/keto reductase family protein n=89 Tax=Escherichia RepID=D7XNT3_ECOLX rbh
hypothetical protein
Oxidoreductase {ECO:0000313|EMBL:EQY24198.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA
NECEvent2014_7_2_scaffold_253_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7906..8664
DNA (759bp) protein (253aa)
Transcriptional regulator, DeoR family n=940 Tax=Enterobacteriaceae RepID=A8A0W3_ECOHS rbh
DEOR-type transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EQQ12316.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_2_scaffold_253_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8782..10140
DNA (1359bp) protein (453aa)
Major facilitator family transporter n=33 Tax=Escherichia RepID=B2N2N0_ECOLX rbh
major facilitator superfamily protein rbh
Inner membrane metabolite transport protein ydjE {ECO:0000313|EMBL:ENH09061.1}; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_7_2_scaffold_253_11
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10233..10874)
DNA (642bp) protein (214aa)
nicotinamidase/pyrazinamidase (EC:3.5.1.19) rbh
Nicotinamidase {ECO:0000313|EMBL:CDK73331.1}; EC=3.5.1.19 {ECO:0000313|EMBL:CDK73331.1};; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; K
Pyrazinamidase/nicotinamidase n=148 Tax=Escherichia RepID=PNCA_ECOLI rbh
NECEvent2014_7_2_scaffold_253_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10885..11901)
DNA (1017bp) protein (339aa)
ansA; cytoplasmic asparaginase I (EC:3.5.1.1)
Cytoplasmic L-asparaginase 1 {ECO:0000313|EMBL:AJF56663.1}; EC=3.5.1.1 {ECO:0000313|EMBL:AJF56663.1};; TaxID=745156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac
L-asparaginase 1 n=45 Tax=Escherichia coli RepID=A8A0W0_ECOHS rbh
NECEvent2014_7_2_scaffold_253_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12068..13924)
DNA (1857bp) protein (619aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide
Protease 4 n=30 Tax=Escherichia coli RepID=A8A0V9_ECOHS rbh
sppA; protease 4
NECEvent2014_7_2_scaffold_253_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14085..14636
DNA (552bp) protein (184aa)
Putative NAD(P)H nitroreductase YdjA n=772 Tax=Enterobacteriaceae RepID=YDJA_ECO57 rbh
ydjA; oxidoreductase
Putative nitroreductase {ECO:0000313|EMBL:CBJ01301.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_253_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14753..15796
DNA (1044bp) protein (348aa)
selD; selenophosphate synthetase (EC:2.7.9.3)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
Selenide, water dikinase n=270 Tax=Escherichia RepID=SELD_ECOHS rbh
NECEvent2014_7_2_scaffold_253_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15801..17747
DNA (1947bp) protein (649aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=144
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase 3 n=7 Tax=Escherichia coli RepID=L2V0L2_ECOLX rbh
NECEvent2014_7_2_scaffold_253_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17989..19689
DNA (1701bp) protein (567aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=L2V1N2_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:ELC08382.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
ybeW; chaperone protein hscC
NECEvent2014_7_2_scaffold_253_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19686..20132
DNA (447bp) protein (149aa)
Uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=L2UYP8_ECOLX
Putative TPR repeat protein {ECO:0000313|EMBL:EDU65178.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
putative TPR repeat protein
NECEvent2014_7_2_scaffold_253_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20126..20203)
DNA (78bp) protein (26aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2861200 RepID=M8V1R6_ECOLX
insB-11; IS1 protein InsA
Insertion element IS1 protein insB {ECO:0000313|EMBL:EOU83632.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
Displaying 19 items

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