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NECEvent2014_7_2_scaffold_278

Alias: 177_002_scaffold_278

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_278_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..61)
DNA (60bp) protein (20aa)
2-oxo-acid dehydrogenase E1 subunit, homodimeric type (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component; EC=1.2.4.1;; TaxID=1240777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 str. 11-03943.;"
Pyruvate dehydrogenase E1 component n=974 Tax=Enterobacteriaceae RepID=ODP1_ECO57
NECEvent2014_7_2_scaffold_278_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(76..2739)
DNA (2664bp) protein (888aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale
aceE; pyruvate dehydrogenase subunit E1 (EC:1.2.4.1)
NECEvent2014_7_2_scaffold_278_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2900..3664)
DNA (765bp) protein (255aa)
Pyruvate dehydrogenase complex repressor n=1421 Tax=Enterobacteriaceae RepID=PDHR_ECO57 rbh
pdhR; pdhR
Transcriptional repressor for pyruvate dehydrogenase complex {ECO:0000313|EMBL:AJA24032.1}; TaxID=1330457 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_7_2_scaffold_278_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4208..5578
DNA (1371bp) protein (457aa)
Aromatic amino acid transport protein AroP n=390 Tax=Enterobacteriaceae RepID=AROP_ECOLI rbh
aroP; aromatic amino acid transporter
Aromatic amino acid transporter AroP {ECO:0000313|EMBL:BAI34114.1}; TaxID=585396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_7_2_scaffold_278_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5621..6475)
DNA (855bp) protein (285aa)
Protein AmpE n=458 Tax=Enterobacteriaceae RepID=AMPE_ECOLI rbh
ampE; inner membrane protein
Protein AmpE {ECO:0000313|EMBL:ELE05964.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;
NECEvent2014_7_2_scaffold_278_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6472..7023)
DNA (552bp) protein (184aa)
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD {ECO:0000313|EMBL:ENA37134.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ENA37134.1};; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente
ampD; N-acetyl-anhydromuranmyl-L-alanine amidase (EC:3.5.1.28)
AmpD protein n=23 Tax=Escherichia coli RepID=K3KZW8_ECOLX rbh
NECEvent2014_7_2_scaffold_278_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7111..8004
DNA (894bp) protein (298aa)
Nicotinate-nucleotide diphosphorylase {ECO:0000313|EMBL:EZK04394.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EZK04394.1};; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
quinolinate phosphoribosyltransferase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Escherichia coli RepID=L2VD22_ECOLX rbh
NECEvent2014_7_2_scaffold_278_8
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8204..8644
DNA (441bp) protein (147aa)
Prelipin peptidase dependent protein n=291 Tax=Enterobacteriaceae RepID=C3TQE2_ECOLX
hcpA; major pilin subunit
Prepilin-type N-terminal cleavage/methylation domain protein {ECO:0000313|EMBL:EIQ35735.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_7_2_scaffold_278_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8654..10039
DNA (1386bp) protein (462aa)
Transport protein HofB n=8 Tax=Escherichia coli RepID=K3KZZ1_ECOLX rbh
Type II secretion system (T2SS), E, N-terminal domain protein {ECO:0000313|EMBL:EMX13186.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
hofB_hcpB; hypothetical protein rbh
NECEvent2014_7_2_scaffold_278_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10029..11231
DNA (1203bp) protein (401aa)
Protein transporter hofC n=2 Tax=Escherichia coli RepID=L2VC69_ECOLX rbh
Protein transporter hofC {ECO:0000313|EMBL:ELC12419.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
type IV pilin biogenesis protein
NECEvent2014_7_2_scaffold_278_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11266..12309)
DNA (1044bp) protein (348aa)
guaC; guanosine 5'-monophosphate oxidoreductase (EC:1.7.1.7)
GMP reductase {ECO:0000256|HAMAP-Rule:MF_00596, ECO:0000256|RuleBase:RU003929}; EC=1.7.1.7 {ECO:0000256|HAMAP-Rule:MF_00596, ECO:0000256|RuleBase:RU003929};; Guanosine 5'-monophosphate oxidoreductase
GMP reductase n=815 Tax=Enterobacteriaceae RepID=GUAC_ECO27 rbh
NECEvent2014_7_2_scaffold_278_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12534..13154
DNA (621bp) protein (207aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24) rbh
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=585055 species="Bacteria; Pr
Dephospho-CoA kinase n=113 Tax=Enterobacteriaceae RepID=B7LFX1_ECO55 rbh
NECEvent2014_7_2_scaffold_278_13
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13154..13897
DNA (744bp) protein (248aa)
Cell division protein ZapD n=9 Tax=Enterobacteriaceae RepID=ZAPD_SHIDS rbh
yacF; hypothetical protein
Cell division protein ZapD {ECO:0000256|HAMAP-Rule:MF_01092, ECO:0000256|SAAS:SAAS00004483}; Z ring-associated protein D {ECO:0000256|HAMAP-Rule:MF_01092}; TaxID=754093 species="Bacteria; Proteobacter
NECEvent2014_7_2_scaffold_278_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13907..14104
DNA (198bp) protein (66aa)
DNA gyrase inhibitor YacG n=1283 Tax=Enterobacteriaceae RepID=YACG_ECO24
yacG; DNA gyrase inhibitor
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_7_2_scaffold_278_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14320..14709)
DNA (390bp) protein (130aa)
7,8-dihydro-8-oxoguanine-triphosphatase {ECO:0000313|EMBL:CCK45260.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCK45260.1};; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions n=101 Tax=Escherichia coli RepID=J7R0D8_ECOLX
nucleoside triphosphate pyrophosphohydrolase MutT
NECEvent2014_7_2_scaffold_278_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14769..17474)
DNA (2706bp) protein (902aa)
Protein translocase subunit SecA n=5 Tax=Escherichia coli RepID=T7NM84_ECOLX rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
secA; preprotein translocase subunit, ATPase
NECEvent2014_7_2_scaffold_278_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17536..18123)
DNA (588bp) protein (196aa)
Secretion monitor n=2 Tax=Escherichia coli RepID=L3HZV0_ECOLX rbh
secretion monitor family proten
Secretion monitor {ECO:0000256|HAMAP-Rule:MF_01332}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_7_2_scaffold_278_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18279..18587)
DNA (309bp) protein (103aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=7 Tax=Escherichia coli RepID=N2Y0L2_ECOLX
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC
Displaying 18 items

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