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NECEvent2014_7_2_scaffold_286

Alias: 177_002_scaffold_286

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_286_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..81
DNA (81bp) protein (27aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2872000 RepID=M8TDC4_ECOLX
insB-12; IS1 protein InsB
Putative transposase {ECO:0000313|EMBL:KDX46431.1}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_7_2_scaffold_286_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(75..1073)
DNA (999bp) protein (333aa)
Uncharacterized HTH-type transcriptional regulator YcjW n=173 Tax=Escherichia RepID=YCJW_ECOLI rbh
ycjW; putative DNA-binding transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ELC09721.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_2_scaffold_286_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1229..2626
DNA (1398bp) protein (466aa)
Uncharacterized protein YcjX n=127 Tax=Escherichia RepID=YCJX_ECOLI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KDX87522.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_286_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2623..3684
DNA (1062bp) protein (354aa)
UPF0283 membrane protein YcjF n=565 Tax=Escherichia RepID=YCJF_ECO45 rbh
ycjF; putative inner membrane protein
UPF0283 membrane protein YcjF {ECO:0000256|HAMAP-Rule:MF_01085}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_7_2_scaffold_286_5
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3832..5373
DNA (1542bp) protein (514aa)
Transcriptional regulatory protein TyrR n=301 Tax=Enterobacteriaceae RepID=TYRR_ECOLI rbh
tyrR; DNA-binding transcriptional regulator TyrR
Transcriptional regulatory protein tyrR {ECO:0000313|EMBL:EGI96806.1}; TaxID=766141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="S
NECEvent2014_7_2_scaffold_286_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5417..5923)
DNA (507bp) protein (169aa)
Thiol peroxidase n=1117 Tax=Enterobacteriaceae RepID=TPX_ECO57 rbh
tpx; thiol peroxidase
Lipid hydroperoxide peroxidase {ECO:0000313|EMBL:AFH11050.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_7_2_scaffold_286_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6042..7007
DNA (966bp) protein (322aa)
L-Ala-D/L-Glu epimerase {ECO:0000313|EMBL:KDX87526.1}; EC=5.1.1.- {ECO:0000313|EMBL:KDX87526.1};; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
L-Ala-D/L-Glu epimerase n=133 Tax=Escherichia RepID=AEEP_ECOLI rbh
ycjG; L-Ala-D/L-Glu epimerase rbh
NECEvent2014_7_2_scaffold_286_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6982..7710)
DNA (729bp) protein (243aa)
Protein MpaA n=455 Tax=Enterobacteriaceae RepID=MPAA_ECO57 rbh
peptidase M14 carboxypeptidase A
Zinc carboxypeptidase {ECO:0000313|EMBL:EFK27619.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_7_2_scaffold_286_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7792..7974)
DNA (183bp) protein (61aa)
Putative uncharacterized protein YmjC n=219 Tax=Enterobacteriaceae RepID=YMJC_ECOLI
ymjC; putative oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:KDY62908.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_286_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8171..8965)
DNA (795bp) protein (265aa)
Uncharacterized protein YcjY n=141 Tax=Escherichia RepID=YCJY_ECOLI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ69381.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_286_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9103..10002
DNA (900bp) protein (300aa)
Uncharacterized HTH-type transcriptional regulator YcjZ n=170 Tax=Enterobacteriaceae RepID=YCJZ_ECOLI rbh
ycjZ; DNA-binding transcriptional regulator, LYSR-type
LysR substrate binding domain protein {ECO:0000313|EMBL:EFK15710.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_2_scaffold_286_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10339..11952
DNA (1614bp) protein (538aa)
Periplasmic murein peptide-binding protein n=324 Tax=Escherichia RepID=MPPA_ECOLI rbh
extracellular solute-binding protein family 5
Periplasmic murein peptide-binding protein {ECO:0000313|EMBL:KDY62912.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_7_2_scaffold_286_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12003..13034)
DNA (1032bp) protein (344aa)
Low conductance mechanosensitive channel YnaI n=712 Tax=Enterobacteriaceae RepID=YNAI_ECO57 rbh
ynaI; inner membrane protein
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:ESD99104.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
NECEvent2014_7_2_scaffold_286_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13278..13535
DNA (258bp) protein (86aa)
Uncharacterized protein YnaJ n=1383 Tax=Enterobacteriaceae RepID=YNAJ_ECO57
hypothetical protein
Inner membrane protein {ECO:0000313|EMBL:EQN28593.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_286_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13585..14535)
DNA (951bp) protein (317aa)
Universal stress protein E n=1135 Tax=Enterobacteriaceae RepID=USPE_ECO57 rbh
universal stress protein E UspE
Universal stress protein E {ECO:0000313|EMBL:KDZ38865.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_7_2_scaffold_286_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14687..14857)
DNA (171bp) protein (57aa)
Fumarate and nitrate reduction regulatory protein n=1 Tax=Shigella boydii 965-58 RepID=I6DK40_SHIBO
fnr; DNA-binding transcriptional dual regulator
Fumarate and nitrate reduction regulatory protein {ECO:0000313|EMBL:ELC88941.1}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
NECEvent2014_7_2_scaffold_286_17
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14860..15351)
DNA (492bp) protein (164aa)
Fumarate and nitrate reduction regulatory protein n=563 Tax=Enterobacteriaceae RepID=FNR_SALTY
fnr; fumarate/nitrate reduction transcriptional regulator
Fumarate/nitrate reduction transcriptional regulator {ECO:0000313|EMBL:ESH92381.1}; TaxID=1173798 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmone
NECEvent2014_7_2_scaffold_286_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15546..16061)
DNA (516bp) protein (172aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF
Methylated-DNA--protein-cysteine methyltransferase n=302 Tax=Enterobacteriaceae RepID=OGT_ECOLI rbh
ogt; O-6-alkylguanine-DNA:cysteine-proteinmethyltransferase
NECEvent2014_7_2_scaffold_286_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16072..17598)
DNA (1527bp) protein (509aa)
Aminobenzoyl-glutamate transport protein n=568 Tax=Enterobacteriaceae RepID=B5Z0Q6_ECO5E rbh
abgT; putative aminobenzoyl-glutamate transporter
Transporter {ECO:0000313|EMBL:ETE14773.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10
Displaying 19 items

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