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NECEvent2014_7_2_scaffold_288

Alias: 177_002_scaffold_288

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_288_1
unknown

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2..73
DNA (72bp) protein (24aa)
insK; IS150 protein
NECEvent2014_7_2_scaffold_288_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(70..2118)
DNA (2049bp) protein (683aa)
Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family n=4 Tax=Escherichia coli RepID=B1IR03_ECOLC rbh
anaerobic dimethyl sulfoxide reductase subunit A
Oxidoreductase {ECO:0000313|EMBL:EQY62505.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA
NECEvent2014_7_2_scaffold_288_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2317..2622)
DNA (306bp) protein (102aa)
Uncharacterized protein YnfD n=167 Tax=Escherichia RepID=YNFD_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDK81053.1}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_288_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2694..3440
DNA (747bp) protein (249aa)
UPF0257 lipoprotein YnfC n=464 Tax=Enterobacteriaceae RepID=J7Q7L1_ECOLX rbh
ynfC; hypothetical protein
UPF0257 lipoprotein YnfC {ECO:0000256|HAMAP-Rule:MF_01065}; Flags: Precursor;; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_7_2_scaffold_288_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3443..4003)
DNA (561bp) protein (187aa)
speG; spermidine N1-acetyltransferase (EC:2.3.1.57)
Spermidine N(1)-acetyltransferase {ECO:0000313|EMBL:EMX39896.1}; EC=2.3.1.57 {ECO:0000313|EMBL:EMX39896.1};; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
Spermidine N(1)-acetyltransferase n=643 Tax=Enterobacteriaceae RepID=ATDA_ECO57 rbh
NECEvent2014_7_2_scaffold_288_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4038..4379)
DNA (342bp) protein (114aa)
UPF0482 protein YnfB n=326 Tax=Escherichia RepID=YNFB_ECO8A
ynfB; hypothetical protein
UPF0482 protein YnfB {ECO:0000256|HAMAP-Rule:MF_01581}; Flags: Precursor;; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_7_2_scaffold_288_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4514..4840
DNA (327bp) protein (109aa)
UPF0060 membrane protein YnfA n=45 Tax=Enterobacteriaceae RepID=YNFA_SHIF8
ynfA; membrane protein ynfA
UPF0060 membrane protein YnfA {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_7_2_scaffold_288_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5046..6260
DNA (1215bp) protein (405aa)
Starvation-sensing protein RspA n=603 Tax=Enterobacteriaceae RepID=RSPA_ECOLI rbh
rspA; putative dehydratase
Starvation-sensing protein rspA {ECO:0000313|EMBL:KEN98900.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_2_scaffold_288_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6272..7291
DNA (1020bp) protein (340aa)
Starvation-sensing protein RspB n=117 Tax=Escherichia RepID=RSPB_ECOLI rbh
rspB; putative dehydrogenase rbh
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:KDY50938.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_7_2_scaffold_288_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7349..7459
DNA (111bp) protein (37aa)
Uncharacterized protein n=15 Tax=Escherichia coli RepID=B7LZX1_ECO8A
inner membrane metabolite transport protein YdfJ
YnfP protein {ECO:0000313|EMBL:CAU97596.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain
NECEvent2014_7_2_scaffold_288_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7479..8759)
DNA (1281bp) protein (427aa)
Integrase n=73 Tax=Escherichia RepID=D3GTE6_ECO44 rbh
intQ; putative defective integrase; Qin prophage rbh
Qin prophage predicted defective integrase {ECO:0000313|EMBL:EHV59173.1}; TaxID=868161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_7_2_scaffold_288_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8794..9030)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli H494 RepID=H1FAR3_ECOLX
Excisionase
Uncharacterized protein {ECO:0000313|EMBL:EOV79026.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_288_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9118..11589)
DNA (2472bp) protein (824aa)
Exonuclease family protein n=7 Tax=Escherichia coli RepID=H5MU79_ECOLX rbh
Exonuclease {ECO:0000313|EMBL:KHI27713.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
exonuclease rbh
NECEvent2014_7_2_scaffold_288_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11682..11873)
DNA (192bp) protein (64aa)
Uncharacterized protein YdfD n=117 Tax=Escherichia coli RepID=YDFD_ECOLI
ydfD; Qin prophage; hypothetical protein
Phage protein {ECO:0000313|EMBL:EQX85215.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3
NECEvent2014_7_2_scaffold_288_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11870..12058)
DNA (189bp) protein (63aa)
Qin prophage cell division inhibition domain protein n=2 Tax=Escherichia coli RepID=H5QEA2_ECOLX
dicB; putative regulator of cell division encoded by prophage
DicB protein {ECO:0000313|EMBL:ESA85211.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.
NECEvent2014_7_2_scaffold_288_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12626..12844)
DNA (219bp) protein (73aa)
Uncharacterized protein YdfC n=116 Tax=Enterobacteriaceae RepID=YDFC_ECOLI
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOV67473.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.
NECEvent2014_7_2_scaffold_288_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12874..13044)
DNA (171bp) protein (57aa)
Uncharacterized protein n=72 Tax=Escherichia coli RepID=E9TDM0_ECOLX
ydfB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK19514.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_288_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13004..13159)
DNA (156bp) protein (52aa)
Uncharacterized protein n=68 Tax=Escherichia coli RepID=G7REA7_ECOC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ28081.1}; TaxID=741093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_288_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13326..13733)
DNA (408bp) protein (136aa)
HTH-type transcriptional regulator DicA n=70 Tax=Escherichia coli RepID=DICA_ECOLI
XRE family transcriptional regulator
Phage repressor protein {ECO:0000313|EMBL:EOU95285.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_288_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13817..14047
DNA (231bp) protein (77aa)
Repressor protein of division inhibition gene dicB n=95 Tax=Escherichia coli RepID=DICC_ECOLI
dicC; DNA-binding transcriptional regulator DicC
Division inhibition gene repressor protein DicB {ECO:0000313|EMBL:AEE56615.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_7_2_scaffold_288_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14031..14552
DNA (522bp) protein (174aa)
Uncharacterized protein n=50 Tax=Escherichia coli RepID=B7LZV9_ECO8A rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EFK19510.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_288_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14533..15498
DNA (966bp) protein (322aa)
Uncharacterized protein n=54 Tax=Escherichia coli RepID=B7LZV8_ECO8A rbh
hypothetical protein
Putative replication protein {ECO:0000313|EMBL:KEO24984.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_7_2_scaffold_288_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15539..15961
DNA (423bp) protein (141aa)
Uncharacterized protein n=87 Tax=Escherichia coli RepID=B7LZV7_ECO8A
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOV98623.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.
NECEvent2014_7_2_scaffold_288_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15958..16314
DNA (357bp) protein (119aa)
Uncharacterized protein n=109 Tax=Escherichia coli RepID=B7NUS0_ECO7I
hypothetical protein
Putative methyltransferase {ECO:0000313|EMBL:AEQ12634.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_7_2_scaffold_288_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17467..17646
DNA (180bp) protein (60aa)
Uncharacterized protein n=103 Tax=Escherichia coli RepID=B2N032_ECOLX
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:KDY42401.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_2_scaffold_288_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17621..17803)
DNA (183bp) protein (61aa)
Uncharacterized protein n=66 Tax=Escherichia coli RepID=B7NUS2_ECO7I
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV78823.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Displaying 26 items

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