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NECEvent2014_7_2_scaffold_302

Alias: 177_002_scaffold_302

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_302_trna_4
unknown

Not on your lists

comp(1..61)
DNA (61bp)
transferRNA
NECEvent2014_7_2_scaffold_302_trna_3
unknown

Not on your lists

comp(113..196)
DNA (84bp)
transferRNA
NECEvent2014_7_2_scaffold_302_trna_2
unknown

Not on your lists

comp(220..292)
DNA (73bp)
transferRNA
NECEvent2014_7_2_scaffold_302_trna_1
unknown

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comp(354..427)
DNA (74bp)
transferRNA
NECEvent2014_7_2_scaffold_302_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(530..1915)
DNA (1386bp) protein (462aa)
Probable transport protein YifK n=770 Tax=Enterobacteriaceae RepID=YIFK_ECOLI rbh
transport protein YifK
Amino acid permease-associated region {ECO:0000313|EMBL:ADX53112.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_2_scaffold_302_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2106..2846)
DNA (741bp) protein (247aa)
UDP-N-acetyl-D-mannosaminuronic acid transferase {ECO:0000256|HAMAP-Rule:MF_01001, ECO:0000256|SAAS:SAAS00014171}; Short=UDP-ManNAcA transferase {ECO:0000256|HAMAP-Rule:MF_01001};; EC=2.4.1.180 {ECO:0
UDP-N-acetyl-D-mannosaminuronic acid transferase n=701 Tax=Enterobacteriaceae RepID=WECG_ECO24 rbh
rffM; putative UDP-N-acetyl-D-mannosaminuronic acid transferase
NECEvent2014_7_2_scaffold_302_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2849..4201)
DNA (1353bp) protein (451aa)
Putative ECA polymerase n=576 Tax=Enterobacteriaceae RepID=WZYE_ECO24 rbh
wzyE; common antigen polymerase
Probable ECA polymerase {ECO:0000256|HAMAP-Rule:MF_01003, ECO:0000256|SAAS:SAAS00275810}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Es
NECEvent2014_7_2_scaffold_302_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4198..5277)
DNA (1080bp) protein (360aa)
TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase {ECO:0000256|HAMAP-Rule:MF_01002, ECO:0000256|SAAS:SAAS00151893}; EC=2.4.1.325 {ECO:0000256|HAMAP-Rule:MF_01002, ECO:0000256|SAAS:SAAS001
4-alpha-L-fucosyltransferase n=70 Tax=Escherichia RepID=B2N5G1_ECOLX rbh
4-alpha-L-fucosyltransferase
NECEvent2014_7_2_scaffold_302_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5274..6524)
DNA (1251bp) protein (417aa)
Protein WzxE n=344 Tax=Enterobacteriaceae RepID=WZXE_ECOLI rbh
O-antigen translocase
Protein wzxE {ECO:0000313|EMBL:KEJ54433.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-0
NECEvent2014_7_2_scaffold_302_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6526..7656)
DNA (1131bp) protein (377aa)
dTDP-4-amino-4,6-dideoxygalactose transaminase n=214 Tax=Enterobacteriaceae RepID=RFFA_ECOLI rbh
TDP-4-oxo-6-deoxy-D-glucose transaminase
Lipopolysaccharide biosynthesis protein rffA {ECO:0000313|EMBL:EOW01574.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_7_2_scaffold_302_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7661..8335)
DNA (675bp) protein (225aa)
dTDP-fucosamine acetyltransferase n=241 Tax=Escherichia RepID=WECD_ECOLI rbh
rffC; TDP-fucosamine acetyltransferase
TDP-D-fucosamine acetyltransferase {ECO:0000313|EMBL:ESA95771.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_7_2_scaffold_302_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8313..9194)
DNA (882bp) protein (294aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobact
Glucose-1-phosphate thymidylyltransferase 2 n=816 Tax=Enterobacteriaceae RepID=RMLA2_ECOLI rbh
glucose-1-phosphate thymidylyltransferase
NECEvent2014_7_2_scaffold_302_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9213..10280)
DNA (1068bp) protein (356aa)
rffG; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46) rbh
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
dTDP-glucose 4,6-dehydratase n=59 Tax=Escherichia RepID=C6EG24_ECOBD rbh
NECEvent2014_7_2_scaffold_302_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10280..11542)
DNA (1263bp) protein (421aa)
UDP-N-acetyl-D-mannosamine dehydrogenase n=622 Tax=Bacteria RepID=WECC_ECO57 rbh
rffD; UDP-N-acetyl-D-mannosamine dehydrogenase rbh
Nucleotide sugar dehydrogenase family protein {ECO:0000313|EMBL:KDY61135.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_7_2_scaffold_302_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11539..12669)
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine 2-epimerase n=475 Tax=Enterobacteriaceae RepID=E2QHW2_ECOLX rbh
wecB; UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ESD38757.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_7_2_scaffold_302_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12725..13771)
DNA (1047bp) protein (349aa)
Lipopolysaccharide biosynthesis protein WzzE n=658 Tax=Enterobacteriaceae RepID=WZZE_ECO57 rbh
wzzE; regulator of length of O-antigen component of lipopolysaccharide chains
Lipopolysaccharide biosynthesis protein WzzE {ECO:0000313|EMBL:EZD88942.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_7_2_scaffold_302_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13783..14886)
DNA (1104bp) protein (368aa)
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase n=802 Tax=Enterobacteriaceae RepID=WECA_ECOL6 rbh
rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:EOU86297.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
NECEvent2014_7_2_scaffold_302_14
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14898..15116)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Escherichia coli 101-1 RepID=B3XGI3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CDK71461.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pne
hypothetical protein
NECEvent2014_7_2_scaffold_302_15
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15126..16385)
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=941429 specie
Transcription termination factor Rho n=1427 Tax=Enterobacteriaceae RepID=RHO_ECO57 rbh
rho; transcription termination factor
NECEvent2014_7_2_scaffold_302_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16712..17041)
DNA (330bp) protein (110aa)
Thioredoxin n=7 Tax=Escherichia coli RepID=D7XDE5_ECOLX
Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;
Displaying 20 items

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