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NECEvent2014_7_2_scaffold_346

Alias: 177_002_scaffold_346

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_346_trna_1
unknown

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comp(3..93)
DNA (91bp)
transferRNA
NECEvent2014_7_2_scaffold_346_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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386..1768
DNA (1383bp) protein (461aa)
Inner membrane symporter YicJ n=478 Tax=Enterobacteriaceae RepID=YICJ_ECOLI rbh
yicJ; sugar transporter
Putative permease {ECO:0000313|EMBL:EKI49012.1}; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1
NECEvent2014_7_2_scaffold_346_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1778..4096
DNA (2319bp) protein (773aa)
Alpha-xylosidase n=116 Tax=Enterobacteriaceae RepID=XYLS_ECOLI rbh
glycoside hydrolase family protein
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:ESA87881.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_7_2_scaffold_346_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4149..5858)
DNA (1710bp) protein (570aa)
AsmA family protein n=39 Tax=Escherichia coli RepID=A8A6B7_ECOHS rbh
AsmA family protein {ECO:0000313|EMBL:AFG42602.1}; TaxID=910348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P
yicH; AsmA family protein rbh
NECEvent2014_7_2_scaffold_346_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5979..7370)
DNA (1392bp) protein (464aa)
Xanthine permease XanP n=1200 Tax=root RepID=XANP_ECO57 rbh
yicE; Putative xanthine permease
Uracil-xanthine permease family protein {ECO:0000313|EMBL:EMW15786.1}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_7_2_scaffold_346_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7650..8855
DNA (1206bp) protein (402aa)
Glutamate transport n=813 Tax=Enterobacteriaceae RepID=C3SM67_ECOLX rbh
sodium/glutamate symporter
Sodium/glutamate symporter {ECO:0000313|EMBL:EGW86580.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_2_scaffold_346_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9024..11105)
DNA (2082bp) protein (694aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EZJ68538.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EZJ68538.1};; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
ATP-dependent DNA helicase RecG n=10 Tax=Escherichia coli RepID=A8A6B4_ECOHS rbh
recG; ATP-dependent DNA helicase RecG rbh
NECEvent2014_7_2_scaffold_346_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11111..11767)
DNA (657bp) protein (219aa)
spoU; tRNA guanosine-2'-O-methyltransferase (EC:2.1.1.34)
tRNA guanosine-2'-O-methyltransferase {ECO:0000313|EMBL:KEN96641.1}; EC=2.1.1.34 {ECO:0000313|EMBL:KEN96641.1};; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
tRNA (Guanosine-2'-O-) methyltransferase n=1 Tax=Escherichia coli E128010 RepID=E7HWL7_ECOLX rbh
NECEvent2014_7_2_scaffold_346_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11807..13915)
DNA (2109bp) protein (703aa)
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:EHW11291.1}; EC=3.1.7.2 {ECO:0000313|EMBL:EHW11291.1};; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase n=926 Tax=Enterobacteriaceae RepID=SPOT_ECO57 rbh
spoT; bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
NECEvent2014_7_2_scaffold_346_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13934..14212)
DNA (279bp) protein (93aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=2211 Tax=Bacteria RepID=RPOZ_CITK8
Displaying 10 items

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