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NECEvent2014_7_2_scaffold_417

Alias: 177_002_scaffold_417

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_417_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(130..912)
DNA (783bp) protein (261aa)
TatD-related deoxyribonuclease n=188 Tax=Escherichia RepID=B1IS41_ECOLC rbh
yjjV; putative deoxyribonuclease YjjV
Uncharacterized protein {ECO:0000313|EMBL:KEO02823.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_417_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(909..1982)
DNA (1074bp) protein (358aa)
Uncharacterized protein YjjU n=335 Tax=Enterobacteriaceae RepID=YJJU_ECOLI rbh
Phospholipase, patatin family {ECO:0000313|EMBL:EFU35732.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
hypothetical protein
NECEvent2014_7_2_scaffold_417_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2104..2265)
DNA (162bp) protein (54aa)
UPF0391 membrane protein YtjA n=1448 Tax=Enterobacteriaceae RepID=YTJA_ECO24
hypothetical protein
UPF0391 membrane protein YtjA {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_7_2_scaffold_417_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2392..2997)
DNA (606bp) protein (202aa)
Osmotically-inducible protein Y n=946 Tax=Enterobacteriaceae RepID=OSMY_ECOL6 rbh
transport-associated
Phospholipid-binding domain protein {ECO:0000313|EMBL:ESA83543.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_7_2_scaffold_417_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3390..4979)
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=402 Tax=Enterobacteriaceae RepID=RF3_ECO24 rbh
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1444037 species="Bacteria; Proteobacteria; Gammapr
NECEvent2014_7_2_scaffold_417_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5070..5747)
DNA (678bp) protein (226aa)
5'-nucleotidase yjjG n=516 Tax=Escherichia RepID=E2QLD3_ECOLX rbh
yjjG; nucleotidase
Pyrimidine 5'-nucleotidase YjjG {ECO:0000313|EMBL:ELC13124.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_2_scaffold_417_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5762..6208)
DNA (447bp) protein (149aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EHW26604.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EHW26604.1};; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacte
Ribosomal-protein-alanine acetyltransferase n=943 Tax=Enterobacteriaceae RepID=RIMI_ECO57
NECEvent2014_7_2_scaffold_417_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6177..6590)
DNA (414bp) protein (138aa)
DNA polymerase III subunit psi n=841 Tax=Enterobacteriaceae RepID=C3SE92_ECOLX
DNA polymerase III psi subunit
DNA polymerase III subunit psi {ECO:0000256|PIRNR:PIRNR029225}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_7_2_scaffold_417_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6693..7724
DNA (1032bp) protein (344aa)
Ribosomal RNA small subunit methyltransferase C {ECO:0000256|HAMAP-Rule:MF_01862, ECO:0000256|SAAS:SAAS00048249}; EC=2.1.1.172 {ECO:0000256|HAMAP-Rule:MF_01862, ECO:0000256|SAAS:SAAS00048248};; 16S rR
Ribosomal RNA small subunit methyltransferase C n=128 Tax=Escherichia coli RepID=RSMC_ECOLC rbh
rsmC; Ribosomal RNA small subunit methyltransferase C rbh
NECEvent2014_7_2_scaffold_417_trna_1
unknown

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8033..8116
DNA (84bp)
transferRNA
NECEvent2014_7_2_scaffold_417_trna_2
unknown

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8148..8231
DNA (84bp)
transferRNA
NECEvent2014_7_2_scaffold_417_trna_3
unknown

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8269..8352
DNA (84bp)
transferRNA
NECEvent2014_7_2_scaffold_417_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8394..8630)
DNA (237bp) protein (79aa)
Uncharacterized protein n=123 Tax=Enterobacteriaceae RepID=D7ZZK3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESP06215.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_417_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8771..9559
DNA (789bp) protein (263aa)
Siderophore-iron reductase FhuF {ECO:0000313|EMBL:EII45373.1}; EC=1.-.-.- {ECO:0000313|EMBL:EII45373.1};; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
Ferric iron reductase protein fhuF n=35 Tax=Escherichia coli RepID=G0FA33_ECOLX rbh
fhuF; ferric iron reductase protein
NECEvent2014_7_2_scaffold_417_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9597..10274)
DNA (678bp) protein (226aa)
Transcriptional regulator, LuxR family n=487 Tax=Enterobacteriaceae RepID=A7ZVQ7_ECO24 rbh
DNA-binding transcriptional activator BglJ
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KEN84180.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_7_2_scaffold_417_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10232..10957)
DNA (726bp) protein (242aa)
Uncharacterized protein n=11 Tax=Escherichia coli RepID=D3QMF8_ECOCB rbh
yjjQ; hypothetical protein rbh
Putative regulator {ECO:0000313|EMBL:ACI72824.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_7_2_scaffold_417_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11086..11163)
DNA (78bp) protein (26aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2861200 RepID=M8V1R6_ECOLX
insB-11; IS1 protein InsA
Insertion element IS1 protein insB {ECO:0000313|EMBL:EOU83632.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
Displaying 17 items

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