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NECEvent2014_7_2_scaffold_238_8

Organism: NECEvent2014_7_2_Escherichia_coli_51_98_partial

partial RP 21 / 55 MC: 5 BSCG 20 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 8396..9355

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator YidZ n=322 Tax=Enterobacteriaceae RepID=YIDZ_ECO24 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 650
  • Evalue 7.50e-184
  • rbh
yidZ; DNA-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 650
  • Evalue 2.10e-184
HTH-type transcriptional regulator YidZ {ECO:0000256|HAMAP-Rule:MF_01607}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 650
  • Evalue 1.00e-183

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTCTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTGACCAAAGCGGCGAAGCGGATGAACGTGACCCCTTCAGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGCCTGTCGCCCACACCGCTAATGGTCAGCATGGAGCAAAATCTGGCGGAATGGATGCAAATGAGCAATCTGCTGCTGGATAAACCGCACCACCAGACACCGCGCGGCCTGAAGTTTGAGTTGGCGGCGGAATCGCCGCTGATGATGATCATGCTTAATGCGCTGTCGAAACGGATCTACCAACGTTACCCGCAGGCGACCATCAAACTACGTAACTGGGATTACGATTCCTTAGATGCCATTACTCGTGGTGAAGTGGATATTGGTTTTTCCGGTCGCGAAAGCCATCCTCGCTCGCGGGAGCTGTTAAGCTCGCTACCGTTAGCCATTGATTATGAAGTACTGTTTAGTGATGTACCCTGCGTCTGGTTACGCAAAGATCATCCGGCACTGCATGAAACGTGGAATCTGGACACCTTTTTACGTTATCCGCATATCAGCATTTGCTGGGAACAGAGCGACACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGGCGCGAACGCACGATTGCTATGAGCCTGCCGGAATTTGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCGCGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAGCAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTTACGCGTCGATGGCATAA
PROTEIN sequence
Length: 320
MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA*