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NECEvent2014_7_2_scaffold_238

Alias: 177_002_scaffold_238

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_238_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..106
DNA (105bp) protein (35aa)
50S ribosomal protein L34 n=1826 Tax=cellular organisms RepID=RL34_ECO24
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_7_2_scaffold_238_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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156..482
DNA (327bp) protein (109aa)
Ribonuclease P protein component n=1023 Tax=Enterobacteriaceae RepID=C6EGA0_ECOBD
ribonuclease P protein component
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
NECEvent2014_7_2_scaffold_238_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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706..2352
DNA (1647bp) protein (549aa)
Membrane protein insertase YidC n=210 Tax=Enterobacteriaceae RepID=YIDC_ECOBW rbh
inner membrane protein
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
NECEvent2014_7_2_scaffold_238_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2458..3822
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
tRNA modification GTPase MnmE n=234 Tax=Enterobacteriaceae RepID=MNME_ECO8A rbh
trmE; tRNA modification GTPase TrmE
NECEvent2014_7_2_scaffold_238_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4360..5775
DNA (1416bp) protein (472aa)
tryptophanase (EC:4.1.99.1) rbh
Tryptophanase {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909}; EC=4.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909};; L-tryptophan indole-lyase {ECO:0000256|HA
Tryptophanase n=850 Tax=Enterobacteriaceae RepID=TNAA_ECO24 rbh
NECEvent2014_7_2_scaffold_238_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5866..7113
DNA (1248bp) protein (416aa)
Low affinity tryptophan permease n=322 Tax=Enterobacteriaceae RepID=Q5UEU4_ECOLX rbh
tryptophan permease TnaB
Tryptophan permease {ECO:0000313|EMBL:EOW17751.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_7_2_scaffold_238_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7246..8421
DNA (1176bp) protein (392aa)
Multidrug resistance protein MdtL n=139 Tax=Enterobacteriaceae RepID=MDTL_ECOHS rbh
multidrug efflux system protein MdtL
Multidrug resistance protein MdtL {ECO:0000256|HAMAP-Rule:MF_01530}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_7_2_scaffold_238_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8396..9355
DNA (960bp) protein (320aa)
HTH-type transcriptional regulator YidZ n=322 Tax=Enterobacteriaceae RepID=YIDZ_ECO24 rbh
yidZ; DNA-binding transcriptional regulator
HTH-type transcriptional regulator YidZ {ECO:0000256|HAMAP-Rule:MF_01607}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_7_2_scaffold_238_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9512..10261
DNA (750bp) protein (250aa)
Predicted phosphopantetheinyl transferase n=225 Tax=Enterobacteriaceae RepID=C6UI34_ECOBR rbh
phosphopantetheinyl transferase
Uncharacterized protein {ECO:0000313|EMBL:ACT31299.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_238_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10283..10849
DNA (567bp) protein (189aa)
Uncharacterized protein YieF n=694 Tax=cellular organisms RepID=YIEF_ECO57 rbh
NADPH-dependent FMN reductase
Chromate reductase, Class I, flavoprotein {ECO:0000313|EMBL:EOU86613.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_7_2_scaffold_238_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10903..12240)
DNA (1338bp) protein (446aa)
Inner membrane protein yieG n=411 Tax=Enterobacteriaceae RepID=E2QHQ3_ECOLX rbh
yieG; putative inner membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AFS76897.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_238_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12407..13072
DNA (666bp) protein (222aa)
Phosphatase YieH n=4 Tax=Escherichia coli RepID=F4TKZ3_ECOLX rbh
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ESA74928.1}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
yieH; 6-phosphogluconate phosphatase
NECEvent2014_7_2_scaffold_238_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13139..13612
DNA (474bp) protein (158aa)
Inner membrane protein CbrB n=3 Tax=Escherichia coli RepID=L4K5M2_ECOLX rbh
Putative inner membrane protein CbrB {ECO:0000313|EMBL:ESA74927.1}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
putative inner membrane protein
NECEvent2014_7_2_scaffold_238_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13689..14405)
DNA (717bp) protein (239aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase n=23 Tax=Escherichia coli RepID=D8EGP6_ECOLX rbh
glucosamine/galactosamine-6-phosphate isomerase
NECEvent2014_7_2_scaffold_238_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14420..15589)
DNA (1170bp) protein (390aa)
Predicted xylanase n=232 Tax=Enterobacteriaceae RepID=E3PNR8_ECOH1 rbh
xylanase
Isoamylase N-terminal domain protein {ECO:0000313|EMBL:EFU34561.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_7_2_scaffold_238_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15616..17232)
DNA (1617bp) protein (539aa)
Putative outer membrane porin BglH n=65 Tax=Enterobacteriaceae RepID=BGLH_SHISS rbh
yieC; receptor protein
Cryptic outer membrane porin BglH {ECO:0000313|EMBL:EZJ88624.1}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_7_2_scaffold_238_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17318..18712)
DNA (1395bp) protein (465aa)
Cryptic phospho-beta-glucosidase B n=18 Tax=Escherichia RepID=E3PNS0_ECOH1 rbh
6-phospho-beta-glucosidase
Glycosyl hydrolase 1 family protein {ECO:0000313|EMBL:ENA27763.1}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_7_2_scaffold_238_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18731..20608)
DNA (1878bp) protein (626aa)
PTS protein n=1 Tax=Escherichia coli E482 RepID=E9X126_ECOLX rbh
bglF; fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component rbh
Fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component {ECO:0000313|EMBL:BAI33137.1}; TaxID=585395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
NECEvent2014_7_2_scaffold_238_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20742..21578)
DNA (837bp) protein (279aa)
Cryptic beta-glucoside bgl operon antiterminator n=342 Tax=Escherichia RepID=BGLG_ECOLI rbh
transcription antitermination protein BlgG
Cryptic beta-glucoside bgl operon antiterminator {ECO:0000313|EMBL:EKJ11695.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
Displaying 19 items

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