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NECEvent2014_7_2_scaffold_424_5

Organism: NECEvent2014_7_2_Escherichia_coli_51_98_partial

partial RP 21 / 55 MC: 5 BSCG 20 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(2685..3227)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein YrdD n=367 Tax=Escherichia RepID=YRDD_ECOLI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 391
  • Evalue 4.60e-106
  • rbh
yrdD; DNA topoisomerase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 391
  • Evalue 1.30e-106
DNA topoisomerase {ECO:0000313|EMBL:EOW18794.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KT similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 391
  • Evalue 6.50e-106

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGCGAAATCAGCACTGTTCACGGTGCGTAATAATGAGTCCTGCCCAAAGTGCGGGGCTGAACTGGTTATTCGATCCGGGAAACACGGTCCGTTTCTTGGATGCTCACAGTATCCGGCGTGTGACTACGTCCGTCCTCTGAAATCTTCAGCGGATGGACATATCGTCAAAGTTCTGGAGGGGCAGGTTTGCCCTGCATGTGGCGCAAATCTGGTATTACGCCAGGGACGCTTTGGTATGTTTATTGGTTGCATTAACTACCCTGAATGCGAACATACCGAACTTATCGATAAACCGGACGAAACAGCAATTACATGCCCCCAATGTCGGACGGGCCATCTGGTCCAGCGCCGCTCCCGTTATGGCAAAACATTTCACTCTTGTGATCGCTACCCGGAGTGTCAATTTGCCATTAACTTCAAACCCATAGCTGGAGAATGCCCTGAGTGTCATTATCCGCTACTCATCGAAAAGAAAACCGCGCAGGGTGTAAAACACTTTTGTGCCAGTAAACAATGTGGAAAGCCGGTTTCGGCGGAATAA
PROTEIN sequence
Length: 181
MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLEGQVCPACGANLVLRQGRFGMFIGCINYPECEHTELIDKPDETAITCPQCRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKTAQGVKHFCASKQCGKPVSAE*