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NECEvent2014_7_2_scaffold_424

Alias: 177_002_scaffold_424

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_424_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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501..1055
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Escherichia coli LAU-EC10 RepID=V8K4E0_ECOLX rbh
putative transferase
Carbonic anhydrase, family 3 {ECO:0000313|EMBL:EGU95741.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_2_scaffold_424_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1031..1288)
DNA (258bp) protein (86aa)
Uncharacterized protein YrdB n=658 Tax=Enterobacteriaceae RepID=YRDB_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK17428.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_2_scaffold_424_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1285..2103)
DNA (819bp) protein (273aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=164 Tax=Bacteria RepID=AROE_ECOBW rbh
aroE; shikimate 5-dehydrogenase
NECEvent2014_7_2_scaffold_424_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2108..2680)
DNA (573bp) protein (191aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852,
Threonylcarbamoyl-AMP synthase n=172 Tax=Escherichia RepID=TSAC_ECODH rbh
ribosome maturation factor
NECEvent2014_7_2_scaffold_424_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2685..3227)
DNA (543bp) protein (181aa)
Uncharacterized protein YrdD n=367 Tax=Escherichia RepID=YRDD_ECOLI rbh
yrdD; DNA topoisomerase
DNA topoisomerase {ECO:0000313|EMBL:EOW18794.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KT
NECEvent2014_7_2_scaffold_424_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3256..3729)
DNA (474bp) protein (158aa)
Protein Smg n=200 Tax=Enterobacteriaceae RepID=SMG_ECOBW rbh
smg; hypothetical protein rbh
Protein Smg {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=1281204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA
NECEvent2014_7_2_scaffold_424_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3701..4825)
DNA (1125bp) protein (375aa)
Protein smf n=120 Tax=Escherichia RepID=SMF_ECOLI rbh
smf; hypothetical protein
DNA protecting protein DprA {ECO:0000313|EMBL:EGB65363.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_7_2_scaffold_424_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4955..5464
DNA (510bp) protein (170aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=1173 Tax=Enterobacteriaceae RepID=DEF_ECO27 rbh
NECEvent2014_7_2_scaffold_424_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5479..6426
DNA (948bp) protein (316aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=941323 species="B
Methionyl-tRNA formyltransferase n=162 Tax=Escherichia RepID=FMT_ECOBW rbh
fmt; methionyl-tRNA formyltransferase
NECEvent2014_7_2_scaffold_424_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6472..7761
DNA (1290bp) protein (430aa)
rrmB; 16S rRNA methyltransferase B (EC:2.1.1.61)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.176 {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00011820};; 16S rR
Ribosomal RNA small subunit methyltransferase B n=173 Tax=Escherichia RepID=RSMB_ECOBW rbh
NECEvent2014_7_2_scaffold_424_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7783..9159
DNA (1377bp) protein (459aa)
Trk system potassium uptake protein TrkA n=1353 Tax=Enterobacteriaceae RepID=TRKA_ECO57 rbh
trkA; potassium transporter peripheral membrane protein
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EIG80901.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
NECEvent2014_7_2_scaffold_424_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9289..9699
DNA (411bp) protein (137aa)
Large-conductance mechanosensitive channel n=766 Tax=Enterobacteriaceae RepID=MSCL_ECO24
mscL; large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
NECEvent2014_7_2_scaffold_424_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9696..9914)
DNA (219bp) protein (73aa)
Alternative ribosome-rescue factor A n=306 Tax=Enterobacteriaceae RepID=ARFA_ECOLI
hypothetical protein
Alternative ribosome-rescue factor {ECO:0000313|EMBL:ELC14067.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_7_2_scaffold_424_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9970..10395)
DNA (426bp) protein (142aa)
HTH-type transcriptional regulator ZntR n=983 Tax=Enterobacteriaceae RepID=ZNTR_ECO57
zntR; zinc-responsive transcriptional regulator
Zn(II)-responsive transcriptional regulator {ECO:0000313|EMBL:EGB65370.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_7_2_scaffold_424_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10406..10774)
DNA (369bp) protein (123aa)
Uncharacterized protein YhdN n=198 Tax=Enterobacteriaceae RepID=YHDN_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDY58707.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_424_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10881..10973)
DNA (93bp) protein (31aa)
50S ribosomal protein L17 n=8 Tax=Escherichia coli RepID=M8KLD4_ECOLX
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
Displaying 16 items

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