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NECEvent2014_7_3_scaffold_36

Alias: 177_003_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_36_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

226..519
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZGG8_BIFBR
phage integrase
Phage integrase {ECO:0000313|EMBL:AHJ21318.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
NECEvent2014_7_3_scaffold_36_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(849..1082)
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C939_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21319.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 225
NECEvent2014_7_3_scaffold_36_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1107..2084)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=H3KZQ2_BIFBR rbh
filamentation induced by cAMP protein Fic
Fic family protein {ECO:0000313|EMBL:ERI84866.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
NECEvent2014_7_3_scaffold_36_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2145..3458)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DTB5_BIFBR rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI84867.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.
HipA-like C-terminal domain protein rbh
NECEvent2014_7_3_scaffold_36_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3644..3742
DNA (99bp) protein (33aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=S2ZZP5_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75492.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.
NECEvent2014_7_3_scaffold_36_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3794..4198
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQJ2_BIFLS
putative secreted protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75491.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.
NECEvent2014_7_3_scaffold_36_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4314..4853
DNA (540bp) protein (180aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bifidobacterium breve RepID=F6C935_BIFBA rbh
Peptidyl-prolyl cis-trans isomerase rbh
NECEvent2014_7_3_scaffold_36_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4954..7278)
DNA (2325bp) protein (775aa)
GTP diphosphokinase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DYC1_BIFBR rbh
GTP diphosphokinase {ECO:0000313|EMBL:ERI84871.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
GTP pyrophosphokinase/Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase
NECEvent2014_7_3_scaffold_36_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7372..7848)
DNA (477bp) protein (159aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=4 Tax=Bifidobacterium breve RepID=F6C933_BIFBA rbh
Deoxyuridine 5'-triphosphate nucleotidohydrolase rbh
NECEvent2014_7_3_scaffold_36_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7848..8141)
DNA (294bp) protein (98aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C932_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE88310.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213
NECEvent2014_7_3_scaffold_36_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8293..9366
DNA (1074bp) protein (358aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZGB9_BIFBR rbh
Hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD75441.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.
NECEvent2014_7_3_scaffold_36_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9472..10734)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZM44_BIFBR rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD75440.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.
Nucleotide pyrophosphatase
NECEvent2014_7_3_scaffold_36_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10966..13686
DNA (2721bp) protein (907aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriacea
DNA gyrase/topoisomerase IV, A subunit n=3 Tax=Bifidobacterium breve RepID=D4BS93_BIFBR rbh
DNA gyrase subunit A
NECEvent2014_7_3_scaffold_36_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13774..13977)
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=D4BS92_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75438.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.
Hypothetical protein
NECEvent2014_7_3_scaffold_36_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14506..15465)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2C344_BIFBR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95842.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain N
NECEvent2014_7_3_scaffold_36_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16298..21379)
DNA (5082bp) protein (1694aa)
DEAD/DEAH box helicase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DYC8_BIFBR rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:ERI84881.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;
ATP-dependent helicase lhr rbh
NECEvent2014_7_3_scaffold_36_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21543..22535)
DNA (993bp) protein (331aa)
Putative ribokinase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CLD1_BIFBR rbh
Putative ribokinase {ECO:0000313|EMBL:ERI84883.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
putative ribokinase
NECEvent2014_7_3_scaffold_36_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22579..23787)
DNA (1209bp) protein (403aa)
Transporter, major facilitator family protein n=5 Tax=Bifidobacterium breve RepID=F6C923_BIFBA rbh
Multidrug resistance protein, MSF member
Multidrug resistance protein, MSF member {ECO:0000313|EMBL:AHJ21337.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacteri
NECEvent2014_7_3_scaffold_36_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23954..26305)
DNA (2352bp) protein (784aa)
DNA gyrase, B subunit protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CK17_BIFBR rbh
DNA gyrase, B subunit protein {ECO:0000313|EMBL:ERI84885.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JC
DNA gyrase subunit B rbh
NECEvent2014_7_3_scaffold_36_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26432..27850)
DNA (1419bp) protein (473aa)
RNA polymerase sigma factor SigA n=4 Tax=Bifidobacterium breve RepID=D4BS84_BIFBR rbh
RNA polymerase principal sigma factor hrdB rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium br
NECEvent2014_7_3_scaffold_36_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28053..28691)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DTD3_BIFBR rbh
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI84887.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.
NECEvent2014_7_3_scaffold_36_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28890..29981
DNA (1092bp) protein (364aa)
Polyprenyl synthetase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CLD7_BIFBR rbh
Polyprenyl synthase
Polyprenyl synthetase {ECO:0000313|EMBL:ERI84888.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
NECEvent2014_7_3_scaffold_36_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30096..32243
DNA (2148bp) protein (716aa)
Kinase domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C353_BIFBR rbh
Kinase domain protein {ECO:0000313|EMBL:ERI84889.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Serine/threonine protein kinase rbh
NECEvent2014_7_3_scaffold_36_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32284..32994)
DNA (711bp) protein (237aa)
Acyltransferase n=4 Tax=Bifidobacterium breve RepID=F6C918_BIFBA rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AHJ19542.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidob
NECEvent2014_7_3_scaffold_36_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33055..33744
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DTD7_BIFBR rbh
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ21344.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bre
NECEvent2014_7_3_scaffold_36_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33838..34884)
DNA (1047bp) protein (349aa)
trpD; Anthranilate phosphoribosyltransferase (EC:2.4.2.18) rbh
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1261072 sp
Anthranilate phosphoribosyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CLE0_BIFBR rbh
NECEvent2014_7_3_scaffold_36_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35038..37920)
DNA (2883bp) protein (961aa)
Protein translocase subunit SecA n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C359_BIFBR rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacteri
Protein translocase subunit secA rbh
NECEvent2014_7_3_scaffold_36_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38082..38744)
DNA (663bp) protein (221aa)
Ribosome-associated factor Y n=4 Tax=Bifidobacterium breve RepID=F9Y191_BIFBU rbh
Ribosome-associated factor Y
Ribosome-associated factor Y {ECO:0000313|EMBL:ABE95857.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (str
NECEvent2014_7_3_scaffold_36_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39467..40066)
DNA (600bp) protein (200aa)
Regulatory protein RecX n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DYD8_BIFBR rbh
Regulatory protein RecX {ECO:0000313|EMBL:ERI84896.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.
RecX-like protein
NECEvent2014_7_3_scaffold_36_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(40063..41247)
DNA (1185bp) protein (395aa)
Protein RecA n=4 Tax=Bifidobacterium breve RepID=F6C912_BIFBA rbh
RecA protein rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1203540 species="Bacteria; Actinoba
Displaying items 1-30 of 32 in total

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