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NECEvent2014_7_3_scaffold_28

Alias: 177_003_scaffold_28

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_28_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1238)
DNA (1236bp) protein (412aa)
Helicase c2 n=5 Tax=Shigella sonnei RepID=E7K1V9_SHISO rbh
hypothetical protein
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:KDY61704.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_7_3_scaffold_28_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1367..1714
DNA (348bp) protein (116aa)
Uncharacterized protein n=23 Tax=Enterobacteriaceae RepID=C3T6H2_ECOLX
yoaB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK47039.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_28_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2136..2435
DNA (300bp) protein (100aa)
Uncharacterized protein n=127 Tax=Escherichia coli RepID=A7ZMT3_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDU64130.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_28_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2555..2734)
DNA (180bp) protein (60aa)
UPF0181 protein YoaH n=1394 Tax=Enterobacteriaceae RepID=YOAH_ECO24
hypothetical protein
UPF0181 protein YoaH {ECO:0000256|HAMAP-Rule:MF_00507}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_28_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2808..4169
DNA (1362bp) protein (454aa)
pabB; aminodeoxychorismate synthase subunit I (EC:2.6.1.85) rbh
Aminodeoxychorismate synthase {ECO:0000313|EMBL:EYV57354.1}; EC=2.6.1.85 {ECO:0000313|EMBL:EYV57354.1};; TaxID=1446502 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
p-aminobenzoate synthetase, component I n=335 Tax=Escherichia coli RepID=J7QEZ9_ECOLX rbh
NECEvent2014_7_3_scaffold_28_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4173..4751
DNA (579bp) protein (193aa)
Uncharacterized Nudix hydrolase NudL {ECO:0000256|HAMAP-Rule:MF_01592, ECO:0000256|SAAS:SAAS00010716}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01592, ECO:0000256|SAAS:SAAS00280366};; TaxID=1280961 speci
Uncharacterized Nudix hydrolase NudL n=904 Tax=Enterobacteriaceae RepID=NUDL_ECO27 rbh
NUDIX hydrolase
NECEvent2014_7_3_scaffold_28_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4935..6299
DNA (1365bp) protein (455aa)
L-serine dehydratase 1 (EC:4.3.1.17)
L-serine dehydratase 1 n=316 Tax=Enterobacteriaceae RepID=SDHL_ECOLI rbh
L-serine ammonia-lyase {ECO:0000313|EMBL:EFF13074.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_7_3_scaffold_28_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6430..7479
DNA (1050bp) protein (350aa)
Rtn protein n=1 Tax=Shigella boydii ATCC 9905 RepID=E7SVM4_SHIBO
cyclic diguanylate phosphodiesterase domain-containing protein
Phosphodiesterase {ECO:0000313|EMBL:EOV62199.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KT
NECEvent2014_7_3_scaffold_28_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7436..8026
DNA (591bp) protein (197aa)
Putative cyclic-di-GMP phosphodiesterase AdrB n=1 Tax=Escherichia coli DEC14A RepID=H5MUY7_ECOLX
diguanylate phosphodiesterase
Phosphodiesterase {ECO:0000313|EMBL:EHU11386.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC
NECEvent2014_7_3_scaffold_28_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8030..9586)
DNA (1557bp) protein (519aa)
UPF0053 inner membrane protein YoaE n=1151 Tax=Enterobacteriaceae RepID=YOAE_ECO57 rbh
integral membrane protein TerC
Uncharacterized protein {ECO:0000313|EMBL:EZK23182.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_28_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9574..9783)
DNA (210bp) protein (70aa)
Uncharacterized protein n=165 Tax=Escherichia coli RepID=B7USJ2_ECO27
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELI27470.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_28_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10049..11020
DNA (972bp) protein (324aa)
PTS system mannose-specific EIIAB component n=1036 Tax=Enterobacteriaceae RepID=PTNAB_ECO57 rbh
manX; putative PTS system, mannose-specific component rbh
PTS system mannose-specific EIIAB component {ECO:0000313|EMBL:ESA66463.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_7_3_scaffold_28_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11083..11883
DNA (801bp) protein (267aa)
Mannose permease IIC component n=1377 Tax=Enterobacteriaceae RepID=PTNC_ECO57 rbh
manY; mannose-specific PTS system transporter subunit IIC
PTS system, mannose/fructose/sorbose , IIC component family protein {ECO:0000313|EMBL:KEN98634.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
NECEvent2014_7_3_scaffold_28_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11896..12747
DNA (852bp) protein (284aa)
Mannose permease IID component n=1286 Tax=Enterobacteriaceae RepID=PTND_ECO57 rbh
PTS system mannose/fructose/sorbose family transporter subunit IID
Mannose permease IID component {ECO:0000313|EMBL:EFK19716.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_7_3_scaffold_28_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12802..13260
DNA (459bp) protein (153aa)
Uncharacterized protein (Fragment) n=2 Tax=Escherichia coli RepID=D8AAU3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK73590.1}; Flags: Fragment;; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_7_3_scaffold_28_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13689..14255
DNA (567bp) protein (189aa)
Uncharacterized protein n=29 Tax=Enterobacteriaceae RepID=U9XWJ1_ECOLX rbh
hypothetical protein
Probable manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_7_3_scaffold_28_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14252..15061)
DNA (810bp) protein (270aa)
Ribosomal RNA large subunit methyltransferase A {ECO:0000313|EMBL:EZJ98674.1}; EC=2.1.1.187 {ECO:0000313|EMBL:EZJ98674.1};; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Entero
Ribosomal RNA large subunit methyltransferase A n=2 Tax=Escherichia coli RepID=S1EJ60_ECOLX rbh
rrmA; 23S rRNA methyltransferase A
NECEvent2014_7_3_scaffold_28_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15227..15436)
DNA (210bp) protein (70aa)
Cold shock-like protein CspC n=2241 Tax=Bacteria RepID=CSPC_ECO57
cspC; stress , member of the CspA stress protein, member of the CspA family predicted DNA-binding transcriptional regulator
Conserved domain protein {ECO:0000313|EMBL:EGI45480.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_28_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16261..16548)
DNA (288bp) protein (96aa)
Uncharacterized protein YebO n=976 Tax=Enterobacteriaceae RepID=YEBO_ECOL6
hypothetical protein
YebO-like family protein {ECO:0000313|EMBL:EMV20397.1}; TaxID=1116002 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_28_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16925..17164
DNA (240bp) protein (80aa)
Uncharacterized protein YobH n=1056 Tax=Enterobacteriaceae RepID=YOBH_ECOL5
hypothetical protein
YobH-like family protein {ECO:0000313|EMBL:KEO33808.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_28_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17307..18098)
DNA (792bp) protein (264aa)
Transcriptional regulator KdgR n=522 Tax=Enterobacteriaceae RepID=A8A125_ECOHS rbh
kdgR; IclR-family transcriptional regulator rbh
Transcriptional regulator KdgR {ECO:0000313|EMBL:EIG81658.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_7_3_scaffold_28_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18275..19648
DNA (1374bp) protein (458aa)
Uncharacterized transporter YebQ n=373 Tax=Enterobacteriaceae RepID=YEBQ_ECOLI rbh
yebQ; putative transport protein
Multidrug MFS transporter {ECO:0000313|EMBL:KDV28737.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_28_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19694..20575)
DNA (882bp) protein (294aa)
Protease HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; TaxID=1280986 species="Bacteria; Proteobacte
Protease HtpX n=1252 Tax=Enterobacteriaceae RepID=HTPX_ECO24 rbh
heat shock protein HtpX
NECEvent2014_7_3_scaffold_28_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20767..22815)
DNA (2049bp) protein (683aa)
prc; tail-specific protease (EC:3.4.21.102) rbh
Tail-specific protease {ECO:0000313|EMBL:EZJ76132.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EZJ76132.1};; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
Carboxy-terminal protease for penicillin-binding protein 3 n=267 Tax=Enterobacteriaceae RepID=J7QS24_ECOLX rbh
NECEvent2014_7_3_scaffold_28_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22835..23533)
DNA (699bp) protein (233aa)
ProP effector n=1 Tax=Escherichia coli UMEA 3163-1 RepID=T8VXP3_ECOLX rbh
ProP expression regulator
RNA chaperone ProQ {ECO:0000256|HAMAP-Rule:MF_00749, ECO:0000256|SAAS:SAAS00012015}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
NECEvent2014_7_3_scaffold_28_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23630..24181)
DNA (552bp) protein (184aa)
GAF domain protein n=39 Tax=Enterobacteriaceae RepID=B2U474_SHIB3 rbh
putative GAF sensor protein
Protein yebR {ECO:0000313|EMBL:EQY60931.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 32
NECEvent2014_7_3_scaffold_28_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24257..25540
DNA (1284bp) protein (428aa)
Integral membrane protein, PqiA family n=2 Tax=Escherichia coli RepID=D7Y1J0_ECOLX rbh
PqiA family integral membrane protein
Integral membrane protein, PqiA family {ECO:0000313|EMBL:EDU65653.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_7_3_scaffold_28_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25509..28142
DNA (2634bp) protein (878aa)
Mce-related protein n=256 Tax=Enterobacteriaceae RepID=A8A132_ECOHS rbh
yebT; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO11451.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_28_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28216..29661
DNA (1446bp) protein (482aa)
Ribosomal RNA small subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01579}; EC=2.1.1.178 {ECO:0000256|HAMAP-Rule:MF_01579};; 16S rRNA m5C1407 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01579}
Ribosomal RNA small subunit methyltransferase F n=6 Tax=Escherichia coli RepID=L4JR58_ECOLX rbh
yebU; rRNA (cytosine-C(5)-)-methyltransferase RsmF rbh
NECEvent2014_7_3_scaffold_28_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29779..30015
DNA (237bp) protein (79aa)
Uncharacterized protein YebV n=1338 Tax=Bacteria RepID=YEBV_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA66442.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Displaying items 1-30 of 56 in total

View Taxonomy