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NECEvent2014_7_3_scaffold_38

Alias: 177_003_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_38_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..221)
DNA (219bp) protein (73aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Klebsiella oxytoca 10-5243 RepID=H3LQ28_KLEOX
NECEvent2014_7_3_scaffold_38_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(256..996)
DNA (741bp) protein (247aa)
Probable transcriptional regulatory protein YebC n=1110 Tax=Enterobacteriaceae RepID=YEBC_ECO57 rbh
yebC; hypothetical protein
Probable transcriptional regulatory protein YebC {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
NECEvent2014_7_3_scaffold_38_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1025..1534)
DNA (510bp) protein (170aa)
dATP pyrophosphohydrolase n=303 Tax=Enterobacteriaceae RepID=B5YR10_ECO5E rbh
nudB; dihydroneopterin triphosphate pyrophosphatase
dATP pyrophosphohydrolase {ECO:0000313|EMBL:EGU99587.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_38_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1595..3367)
DNA (1773bp) protein (591aa)
Aspartate--tRNA ligase n=98 Tax=cellular organisms RepID=SYD_ECOBW rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EOW15217.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
aspS; aspartyl-tRNA synthetase
NECEvent2014_7_3_scaffold_38_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3677..4243
DNA (567bp) protein (189aa)
Isochorismatase family protein {ECO:0000313|EMBL:EIH78054.1}; EC=3.-.-.- {ECO:0000313|EMBL:EIH78054.1};; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterob
Uncharacterized protein n=2 Tax=Shigella RepID=Q3Z2M5_SHISS rbh
yecD; hydrolase
NECEvent2014_7_3_scaffold_38_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4240..5058
DNA (819bp) protein (273aa)
UPF0759 protein YecE n=241 Tax=Enterobacteriaceae RepID=YECE_ECOLI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENB13233.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_38_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5111..5506
DNA (396bp) protein (132aa)
Inner membrane protein YecN n=1087 Tax=Enterobacteriaceae RepID=YECN_ECOL6
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ESA85982.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_38_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5547..6290
DNA (744bp) protein (248aa)
tRNA (cmo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01589}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01589};; TaxID=1446596 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
tRNA (cmo5U34)-methyltransferase n=1 Tax=Escherichia coli ATCC 35150 RepID=U5AYE6_ECOLX rbh
yecO; tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase rbh
NECEvent2014_7_3_scaffold_38_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6287..7258
DNA (972bp) protein (324aa)
tRNA (mo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194472}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194476};; TaxID=1125642 species="B
tRNA (mo5U34)-methyltransferase n=50 Tax=Escherichia coli RepID=K3JVE3_ECOLX rbh
cmoB; tRNA mo(5)U34 methyltransferase, SAM-dependent
NECEvent2014_7_3_scaffold_38_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7423..9852)
DNA (2430bp) protein (810aa)
torZ; trimethylamine N-oxide reductase system III, catalytic subunit (EC:1.6.6.9)
Trimethylamine-N-oxide reductase 2 n=2 Tax=Escherichia coli RepID=S1DRH3_ECOLX rbh
Trimethylamine-N-oxide reductase 2 {ECO:0000313|EMBL:EOW07097.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_7_3_scaffold_38_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9877..10977)
DNA (1101bp) protein (367aa)
torY; trimethylamine N-oxide reductase III, c-type cytochrome subunit TorY (EC:1.7.2.3) rbh
Trimethylamine N-oxide reductase III, c-type cytochrome subunit TorY n=62 Tax=Escherichia RepID=A8A175_ECOHS rbh
Cytochrome c-type protein TorY {ECO:0000313|EMBL:EQY60975.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_7_3_scaffold_38_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11365..12111)
DNA (747bp) protein (249aa)
Copper homeostasis protein CutC n=102 Tax=Escherichia RepID=CUTC_ECOHS rbh
cutC; copper homeostasis protein CutC rbh
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_7_3_scaffold_38_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12125..12691)
DNA (567bp) protein (189aa)
Uncharacterized protein n=149 Tax=Escherichia RepID=B2NAW9_ECOLX rbh
hypothetical protein
Protein yecM {ECO:0000313|EMBL:EOW15229.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.
NECEvent2014_7_3_scaffold_38_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12907..14640
DNA (1734bp) protein (578aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1444279 species="Bacteria; Pro
Arginine--tRNA ligase n=228 Tax=Enterobacteriaceae RepID=SYR_ECOBW rbh
argS; arginyl-tRNA synthetase
NECEvent2014_7_3_scaffold_38_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14817..15305
DNA (489bp) protein (163aa)
Uncharacterized protein n=52 Tax=Escherichia RepID=B2NAW7_ECOLX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX05173.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_38_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15425..15817)
DNA (393bp) protein (131aa)
Flagellar protein FlhE n=482 Tax=Enterobacteriaceae RepID=FLHE_ECOLI
flagellar protein FlhE
Uncharacterized protein {ECO:0000313|EMBL:BAI25969.1}; TaxID=573235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_38_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15817..17895)
DNA (2079bp) protein (693aa)
Flagellar biosynthesis protein A n=8 Tax=Escherichia coli RepID=C6EBU8_ECOBD rbh
flhA; flagellar biosynthesis protein A rbh
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EFK26559.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_7_3_scaffold_38_18
Trichuris trichiura, Trichuris, Trichocephalida, Dorylaimia, Nematoda, Metazoa

Not on your lists

comp(17888..19036)
DNA (1149bp) protein (383aa)
Flagellar biosynthetic protein FlhB n=178 Tax=Enterobacteriaceae RepID=A8A182_ECOHS rbh
Bac export 2 domain containing protein {ECO:0000313|EMBL:CDW59918.1}; TaxID=36087 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichuridae; Trichuris.;" sour
flhB; flagellar biosynthesis protein FlhB
NECEvent2014_7_3_scaffold_38_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19238..19882)
DNA (645bp) protein (215aa)
Protein phosphatase CheZ {ECO:0000256|PIRNR:PIRNR002884}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR002884};; Chemotaxis protein CheZ {ECO:0000256|PIRNR:PIRNR002884}; TaxID=216592 species="Bacteria; Proteoba
Protein phosphatase CheZ n=4 Tax=Enterobacteriaceae RepID=B6I0T3_ECOSE rbh
cheZ; chemotaxis protein CheZ
NECEvent2014_7_3_scaffold_38_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19893..20282)
DNA (390bp) protein (130aa)
Chemotaxis protein CheY n=1029 Tax=Enterobacteriaceae RepID=CHEY_ECO57
response regulator receiver protein
Chemotaxis protein CheY {ECO:0000313|EMBL:ABV21114.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_38_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20297..21346)
DNA (1050bp) protein (350aa)
cheB; chemotaxis-specific methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1359206 species="Bacteria; Proteobacteria; Gamma
Chemotaxis response regulator protein-glutamate methylesterase n=455 Tax=Enterobacteriaceae RepID=CHEB_ECOL6 rbh
NECEvent2014_7_3_scaffold_38_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21349..22209)
DNA (861bp) protein (287aa)
chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=1444135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteria
Chemotaxis protein methyltransferase n=128 Tax=Enterobacteriaceae RepID=CHER_ECOLI rbh
NECEvent2014_7_3_scaffold_38_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22228..23829)
DNA (1602bp) protein (534aa)
Methyl-accepting chemotaxis protein IV n=82 Tax=Enterobacteriaceae RepID=MCP4_ECOLI rbh
tap; methyl-accepting protein IV
Methyl-accepting chemotaxis protein IV {ECO:0000313|EMBL:EFJ66367.1}; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_7_3_scaffold_38_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23875..25536)
DNA (1662bp) protein (554aa)
Methyl-accepting chemotaxis protein II n=278 Tax=Enterobacteriaceae RepID=MCP2_ECOLI rbh
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis protein II {ECO:0000313|EMBL:KDY60671.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_7_3_scaffold_38_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25681..26184)
DNA (504bp) protein (168aa)
Chemotaxis protein CheW n=1310 Tax=Enterobacteriaceae RepID=CHEW_ECO57 rbh
purine-binding chemotaxis protein
Chemotaxis protein CheW {ECO:0000313|EMBL:EFJ86827.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_38_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26205..28169)
DNA (1965bp) protein (655aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
CheA signal transduction histidine kinase n=133 Tax=Escherichia coli RepID=B1J0K0_ECOLC rbh
chemotaxis protein CheA rbh
NECEvent2014_7_3_scaffold_38_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28174..29100)
DNA (927bp) protein (309aa)
Motility protein B n=770 Tax=Enterobacteriaceae RepID=MOTB_ECO57 rbh
motB; flagellar motor protein MotB
Chemotaxis protein MotB (Motility protein B) {ECO:0000313|EMBL:CBJ01427.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_7_3_scaffold_38_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29097..29984)
DNA (888bp) protein (296aa)
Motility protein A n=320 Tax=Enterobacteriaceae RepID=MOTA_ECOLI rbh
chemotaxis protein MotA (motility protein A) rbh
Flagellar motor stator protein MotA {ECO:0000313|EMBL:KEL82839.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_7_3_scaffold_38_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30111..30689)
DNA (579bp) protein (193aa)
Flagellar transcriptional regulator FlhC n=1181 Tax=Enterobacteriaceae RepID=FLHC_ECO57 rbh
flhC; Flagellar transcriptional activator protein
Flagellar transcriptional regulator FlhC {ECO:0000256|HAMAP-Rule:MF_01891, ECO:0000256|PIRNR:PIRNR003159}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
NECEvent2014_7_3_scaffold_38_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30692..31042)
DNA (351bp) protein (117aa)
Flagellar transcriptional regulator FlhD n=1 Tax=Escherichia coli ThroopD RepID=M9DYN5_ECOLX
flagellar transcriptional activator
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
Displaying items 1-30 of 40 in total

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