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NECEvent2014_7_3_scaffold_46

Alias: 177_003_scaffold_46

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_46_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..500
DNA (498bp) protein (166aa)
Alpha-2-macroglobulin MG1 domain protein n=1 Tax=Escherichia coli 2731150 RepID=M9DJI4_ECOLX
alpha-2-macroglobulin domain-containing protein
Alpha-2-macroglobulin {ECO:0000313|EMBL:EQY90613.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_7_3_scaffold_46_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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540..2813
DNA (2274bp) protein (758aa)
Penicillin-binding protein 1C n=51 Tax=Escherichia RepID=H4WE26_ECOLX rbh
pbpC; fused transglycosylase / transpeptidase
Penicillin-binding protein 1C {ECO:0000313|EMBL:EFK88467.1}; TaxID=749540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_7_3_scaffold_46_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2962..3393
DNA (432bp) protein (144aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
Nucleoside diphosphate kinase n=1006 Tax=Enterobacteriaceae RepID=NDK_ECO24
nucleoside diphosphate kinase
NECEvent2014_7_3_scaffold_46_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3543..4697
DNA (1155bp) protein (385aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=919 Tax=Enterobacteriaceae RepID=RLMN_ECO24 rbh
rlmN; ribosomal RNA large subunit methyltransferase N
NECEvent2014_7_3_scaffold_46_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4982..5995
DNA (1014bp) protein (338aa)
Cytoskeleton protein RodZ n=256 Tax=Enterobacteriaceae RepID=RODZ_ECOHS rbh
putative regulatory protein rbh
Cytoskeleton protein RodZ {ECO:0000256|HAMAP-Rule:MF_02017, ECO:0000256|SAAS:SAAS00008062}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_7_3_scaffold_46_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6022..7140
DNA (1119bp) protein (373aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=158 Tax=Enterobacteriaceae RepID=ISPG_ECOHS rbh
NECEvent2014_7_3_scaffold_46_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7251..8525
DNA (1275bp) protein (425aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=970 Tax=Enterobacteriaceae RepID=SYH_ECO24 rbh
NECEvent2014_7_3_scaffold_46_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8543..9163
DNA (621bp) protein (207aa)
Uncharacterized protein n=17 Tax=Escherichia coli RepID=M8Z148_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:EOW05947.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
yfgM; hypothetical protein
NECEvent2014_7_3_scaffold_46_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9174..10352
DNA (1179bp) protein (393aa)
Outer membrane protein assembly factor BamB n=330 Tax=Enterobacteriaceae RepID=BAMB_SHIDS rbh
yfgL; outer membrane protein assembly complex subunit YfgL
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
NECEvent2014_7_3_scaffold_46_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10470..11942
DNA (1473bp) protein (491aa)
GTPase Der n=758 Tax=Enterobacteriaceae RepID=DER_ECO24 rbh
engA; GTP-binding protein EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1281204 species="Bacteria; Proteobacteria; Gammaproteobac
NECEvent2014_7_3_scaffold_46_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12011..12226
DNA (216bp) protein (72aa)
Uncharacterized protein n=48 Tax=Enterobacteriaceae RepID=Q32D52_SHIDS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW21454.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_46_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12223..13593)
DNA (1371bp) protein (457aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Escherichia coli 53638 RepID=B2N3A5_ECOLX rbh
NECEvent2014_7_3_scaffold_46_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13755..15221
DNA (1467bp) protein (489aa)
Inosine-5'-monophosphate dehydrogenase n=3 Tax=Shigella flexneri RepID=D2AGV2_SHIF2 rbh
guaB; inosine-5'-monophosphate dehydrogenase GuaB
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
NECEvent2014_7_3_scaffold_46_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15290..16867
DNA (1578bp) protein (526aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=1028 Tax=Enterobacteriaceae RepID=GUAA_ECO45 rbh
NECEvent2014_7_3_scaffold_46_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16960..17499)
DNA (540bp) protein (180aa)
Uncharacterized protein YfgI n=355 Tax=root RepID=YFGI_ECOLI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ67428.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_46_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17515..18030)
DNA (516bp) protein (172aa)
Uncharacterized lipoprotein YfgH n=720 Tax=root RepID=YFGH_ECO57 rbh
putative outer membrane lipoprotein
Glycine zipper family protein {ECO:0000313|EMBL:KDU30737.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_7_3_scaffold_46_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18344..18517)
DNA (174bp) protein (58aa)
Uncharacterized protein YfgG n=1369 Tax=root RepID=YFGG_ECO57
yfgG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQZ99747.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_46_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18553..18705
DNA (153bp) protein (51aa)
Uncharacterized protein n=575 Tax=Enterobacteriaceae RepID=J7QGA8_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIG82176.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_46_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18887..21130
DNA (2244bp) protein (748aa)
Cyclic di-GMP phosphodiesterase YfgF {ECO:0000313|EMBL:ENA06832.1}; EC=3.1.4.52 {ECO:0000313|EMBL:ENA06832.1};; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
EAL domain protein n=17 Tax=Escherichia coli RepID=E2WZL7_ECOLX rbh
yfgF; inner membrane protein
NECEvent2014_7_3_scaffold_46_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21169..22710)
DNA (1542bp) protein (514aa)
Exopolyphosphatase n=1223 Tax=Enterobacteriaceae RepID=PPX_ECO57 rbh
ppx; exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:ESP07900.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H
NECEvent2014_7_3_scaffold_46_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22715..24781)
DNA (2067bp) protein (689aa)
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=834 Tax=Enterobacteriaceae RepID=PPK_ECO57 rbh
NECEvent2014_7_3_scaffold_46_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24952..25590)
DNA (639bp) protein (213aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase 1 n=583 Tax=Enterobacteriaceae RepID=Q9ETH1_ECOLX rbh
NECEvent2014_7_3_scaffold_46_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25590..26627)
DNA (1038bp) protein (346aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=672 Tax=Enterobacteriaceae RepID=PUR5_ECO55 rbh
purM; Phosphoribosylformylglycinamidine cyclo-ligase
NECEvent2014_7_3_scaffold_46_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26952..27578
DNA (627bp) protein (209aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {
Uracil phosphoribosyltransferase n=1381 Tax=Enterobacteriaceae RepID=UPP_ECO24 rbh
NECEvent2014_7_3_scaffold_46_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27664..28953
DNA (1290bp) protein (430aa)
Putative permease (Fragment) n=1 Tax=Escherichia coli MS 78-1 RepID=E1I5N2_ECOLX rbh
uraA; uracil transporter
Putative permease {ECO:0000313|EMBL:EFK47658.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS
NECEvent2014_7_3_scaffold_46_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29003..29749
DNA (747bp) protein (249aa)
DnaA regulatory inactivator Hda n=887 Tax=Enterobacteriaceae RepID=C3T057_ECOLX rbh
DnaA regulatory inactivator Hda {ECO:0000256|SAAS:SAAS00016498}; Flags: Fragment;; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
yfgE; hypothetical protein
NECEvent2014_7_3_scaffold_46_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29887..30246)
DNA (360bp) protein (120aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
Arsenate reductase n=781 Tax=Enterobacteriaceae RepID=B2N3C2_ECOLX
oxidoreductase
NECEvent2014_7_3_scaffold_46_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30267..31730)
DNA (1464bp) protein (488aa)
Beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteo
TPR repeat-containing protein YfgC n=645 Tax=Enterobacteriaceae RepID=YFGC_ECOLI rbh
peptidase M48 Ste24p
NECEvent2014_7_3_scaffold_46_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31943..33004
DNA (1062bp) protein (354aa)
Putative permease PerM n=941 Tax=Enterobacteriaceae RepID=PERM_ECO57 rbh
hypothetical protein
Permease PerM {ECO:0000313|EMBL:EOV72347.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.
NECEvent2014_7_3_scaffold_46_30
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33042..33890)
DNA (849bp) protein (283aa)
Formate/nitrite transporter n=42 Tax=Escherichia coli RepID=A8A2Y3_ECOHS rbh
focB; formate transporter rbh
Formate efflux transporter (TC 2.A.44 family) {ECO:0000313|EMBL:CDK71656.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;"
Displaying items 1-30 of 31 in total

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