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NECEvent2014_7_3_scaffold_123

Alias: 177_003_scaffold_123

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_123_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..467)
DNA (465bp) protein (155aa)
Outer membrane protein C n=5 Tax=Escherichia coli RepID=C6K7M6_ECOLX
ompC; outer membrane protein C
Outer membrane protein C {ECO:0000313|EMBL:EOV61183.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_123_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1206..3878
DNA (2673bp) protein (891aa)
Phosphotransferase RcsD {ECO:0000256|HAMAP-Rule:MF_00980}; EC=2.7.2.- {ECO:0000256|HAMAP-Rule:MF_00980};; Phosphotransfer intermediate RcsD {ECO:0000256|HAMAP-Rule:MF_00980}; TaxID=1444179 species="Ba
Phosphotransferase RcsD n=94 Tax=Escherichia RepID=RCSD_ECOLI rbh
sensor-like histidine kinase YojN rbh
NECEvent2014_7_3_scaffold_123_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3895..4545
DNA (651bp) protein (217aa)
Transcriptional regulatory protein RcsB n=1388 Tax=Enterobacteriaceae RepID=RCSB_ECOLX rbh
rcsB; DNA-binding response regulator in two-component regulatory system with RcsC and RcsD
Transcriptional regulatory protein RcsB {ECO:0000256|HAMAP-Rule:MF_00981}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_7_3_scaffold_123_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4745..7594)
DNA (2850bp) protein (950aa)
Sensor histidine kinase RcsC {ECO:0000256|HAMAP-Rule:MF_00979}; EC=2.7.13.3 {ECO:0000256|HAMAP-Rule:MF_00979};; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Sensor histidine kinase RcsC n=100 Tax=Escherichia RepID=RCSC_ECOLI rbh
rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN
NECEvent2014_7_3_scaffold_123_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7761..9587
DNA (1827bp) protein (609aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
AtoS sensory histidine kinase n=31 Tax=Escherichia coli RepID=C6E9Y1_ECOBD rbh
atoS; AtoS sensory histidine kinase
NECEvent2014_7_3_scaffold_123_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9584..10969
DNA (1386bp) protein (462aa)
Acetoacetate metabolism regulatory protein AtoC n=232 Tax=Enterobacteriaceae RepID=ATOC_ECOLI rbh
acetoacetate metabolism regulatory protein AtoC
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EFJ87876.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_7_3_scaffold_123_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11165..11827
DNA (663bp) protein (221aa)
Acetate CoA-transferase subunit alpha {ECO:0000313|EMBL:KEN89834.1}; EC=2.8.3.8 {ECO:0000313|EMBL:KEN89834.1};; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Acetate CoA-transferase subunit alpha n=290 Tax=Enterobacteriaceae RepID=ATOD_ECOLI rbh
atoD; acetyl-CoA:acetoacetyl-CoA transferase subunit alpha
NECEvent2014_7_3_scaffold_123_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11827..12477
DNA (651bp) protein (217aa)
atoA; acetate CoA-transferase subunit beta (EC:2.8.3.8)
Acetate CoA-transferase subunit beta n=284 Tax=Enterobacteriaceae RepID=ATOA_ECOLI rbh
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EID67237.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_3_scaffold_123_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12474..13796
DNA (1323bp) protein (441aa)
Short-chain fatty acids transporter n=314 Tax=Escherichia RepID=ATOE_ECOLI rbh
short chain fatty acid transporter rbh
Short-chain fatty acids transporter {ECO:0000313|EMBL:KDU53653.1}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_7_3_scaffold_123_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13827..15011
DNA (1185bp) protein (395aa)
atoB; acetyl-CoA acetyltransferase (EC:2.3.1.9) rbh
Acetyl-CoA acetyltransferase n=1 Tax=Escherichia coli KTE102 RepID=S1GR53_ECOLX rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EOW05670.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_7_3_scaffold_123_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15085..15861)
DNA (777bp) protein (259aa)
Uncharacterized protein YfaP n=168 Tax=Enterobacteriaceae RepID=YFAP_ECOLI rbh
yfaP; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEN97324.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_123_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15866..17515)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=11 Tax=Escherichia coli RepID=K3KD79_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM60559.1}; TaxID=1455601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_7_3_scaffold_123_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17516..20413)
DNA (2898bp) protein (966aa)
Alpha-2-macroglobulin family protein n=3 Tax=Escherichia coli RepID=M8KXS1_ECOLX rbh
Alpha-2-macroglobulin family protein {ECO:0000313|EMBL:ESD69417.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
alpha-2-macroglobulin domain-containing protein
Displaying 13 items

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