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NECEvent2014_7_3_scaffold_139

Alias: 177_003_scaffold_139

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_139_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..911)
DNA (909bp) protein (303aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS00016536}; EC=2.6.1.87 {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS0001
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=2 Tax=Escherichia coli RepID=T9CN70_ECOLX
DegT/DnrJ/EryC1/StrS aminotransferase
NECEvent2014_7_3_scaffold_139_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1201..1803
DNA (603bp) protein (201aa)
Lipopolysaccharide core heptose(II)-phosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01868}; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_01868};; Flags: Precursor;; TaxID=1116070 species="Bacteria; Proteoba
Lipopolysaccharide core heptose(II)-phosphate phosphatase n=12 Tax=Escherichia coli RepID=L3IFD6_ECOLX rbh
ais; hypothetical protein
NECEvent2014_7_3_scaffold_139_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1842..2267)
DNA (426bp) protein (142aa)
Nucleoside triphosphatase NudI {ECO:0000256|HAMAP-Rule:MF_01846}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01846};; Pyrimidine deoxynucleoside triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846
NUDIX family hydrolase (EC:3.6.-.-)
Nucleoside triphosphatase NudI n=127 Tax=Escherichia RepID=NUDI_ECO27
NECEvent2014_7_3_scaffold_139_4
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2547..3089
DNA (543bp) protein (181aa)
YfaZ superfamily protein n=1 Tax=Escherichia coli B354 RepID=D6JCF0_ECOLX rbh
outer membrane porin protein
YfaZ family protein {ECO:0000313|EMBL:EJZ65271.1}; TaxID=766155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 148
NECEvent2014_7_3_scaffold_139_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3189..4391
DNA (1203bp) protein (401aa)
CinA-like protein n=13 Tax=Escherichia coli RepID=L3IG83_ECOLX rbh
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1455601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
yfaY; competence damage-inducible protein A
NECEvent2014_7_3_scaffold_139_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4611..5393
DNA (783bp) protein (261aa)
Uncharacterized HTH-type transcriptional regulator RhmR n=179 Tax=Escherichia RepID=RHMR_ECOLI rbh
yfaX; putative DNA-binding transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KDY64891.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_139_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5408..6613
DNA (1206bp) protein (402aa)
L-rhamnonate dehydratase {ECO:0000256|HAMAP-Rule:MF_01288}; Short=RhamD {ECO:0000256|HAMAP-Rule:MF_01288};; EC=4.2.1.90 {ECO:0000256|HAMAP-Rule:MF_01288};; TaxID=1182699 species="Bacteria; Proteobacte
L-rhamnonate dehydratase n=39 Tax=Escherichia coli RepID=RHMD_ECOHS rbh
mandelate racemase/muconate lactonizing enzyme family protein
NECEvent2014_7_3_scaffold_139_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6670..7959
DNA (1290bp) protein (430aa)
Inner membrane transporter RhmT n=1 Tax=Escherichia coli UMEA 3124-1 RepID=T8S2J8_ECOLX rbh
Inner membrane transporter RhmT {ECO:0000313|EMBL:ERA00400.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
yfaV; transporter
NECEvent2014_7_3_scaffold_139_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7977..8780
DNA (804bp) protein (268aa)
2-keto-3-deoxy-L-rhamnonate aldolase {ECO:0000256|HAMAP-Rule:MF_01290}; Short=KDR aldolase {ECO:0000256|HAMAP-Rule:MF_01290};; EC=4.1.2.53 {ECO:0000256|HAMAP-Rule:MF_01290};; 2-dehydro-3-deoxyrhamnona
2-keto-3-deoxy-L-rhamnonate aldolase n=1 Tax=Escherichia coli 5.0959 RepID=I2VSS0_ECOLX rbh
yfaU; Uncharacterized protein YfaU
NECEvent2014_7_3_scaffold_139_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8828..9724)
DNA (897bp) protein (299aa)
Uncharacterized protein yfaD n=38 Tax=Escherichia coli RepID=E2X0A9_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:EZJ74299.1}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
yfaD; hypothetical protein
NECEvent2014_7_3_scaffold_139_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9917..11107)
DNA (1191bp) protein (397aa)
Anaerobic glycerol-3-phosphate dehydrogenase subunit C n=347 Tax=Enterobacteriaceae RepID=GLPC_ECO57 rbh
glpC; sn-glycerol-3-phosphate dehydrogenase subunit C
Anaerobic glycerol-3-phosphate dehydrogenase subunit C {ECO:0000313|EMBL:EQY19877.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche
NECEvent2014_7_3_scaffold_139_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11104..12363)
DNA (1260bp) protein (420aa)
anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC:1.1.5.3)
Anaerobic glycerol-3-phosphate dehydrogenase subunit B n=86 Tax=Escherichia RepID=GLPB_ECOBW rbh
Anaerobic glycerol-3-phosphate dehydrogenase subunit B {ECO:0000256|HAMAP-Rule:MF_00753}; Short=Anaerobic G-3-P dehydrogenase subunit B {ECO:0000256|HAMAP-Rule:MF_00753};; Short=Anaerobic G3Pdhase B {
NECEvent2014_7_3_scaffold_139_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12353..13981)
DNA (1629bp) protein (543aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Glycerol-3-phosphate dehydrogenase n=1 Tax=Escherichia coli B354 RepID=D6JCE3_ECOLX rbh
glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A
NECEvent2014_7_3_scaffold_139_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14254..15612
DNA (1359bp) protein (453aa)
Glycerol-3-phosphate transporter n=638 Tax=Enterobacteriaceae RepID=E2QPA5_ECOLX rbh
glpT; sn-glycerol-3-phosphate transporter
Glycerol-3-phosphate transporter {ECO:0000313|EMBL:EOW06156.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_7_3_scaffold_139_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15617..16693
DNA (1077bp) protein (359aa)
glpQ; glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase, periplasmic n=56 Tax=Escherichia coli RepID=J7Q8J4_ECOLX rbh
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EFK50366.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
NECEvent2014_7_3_scaffold_139_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16735..16941)
DNA (207bp) protein (69aa)
Putative uncharacterized protein YfaH n=171 Tax=Enterobacteriaceae RepID=YFAH_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEN89850.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_139_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17156..17806
DNA (651bp) protein (217aa)
Protein InaA n=400 Tax=Enterobacteriaceae RepID=INAA_ECOLI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV64455.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_139_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17860..18114)
DNA (255bp) protein (85aa)
Uncharacterized ferredoxin-like protein YfaE n=969 Tax=Enterobacteriaceae RepID=YFAE_ECOL6
ferredoxin
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:EFU35139.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_7_3_scaffold_139_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18114..19244)
DNA (1131bp) protein (377aa)
nrdB; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase 1 subunit beta {ECO:0000313|EMBL:EMU69410.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EMU69410.1};; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ent
Ribonucleoside-diphosphate reductase, beta subunit n=18 Tax=Escherichia coli RepID=D7X5L2_ECOLX rbh
Displaying 19 items

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