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NECEvent2014_7_3_scaffold_148

Alias: 177_003_scaffold_148

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_148_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..683)
DNA (681bp) protein (227aa)
Cytochrome bd-II oxidase subunit 1 {ECO:0000313|EMBL:KEN91743.1}; EC=1.10.3.- {ECO:0000313|EMBL:KEN91743.1};; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
Cytochrome bd-II oxidase subunit 1 n=1 Tax=Escherichia coli KTE84 RepID=L4EYH8_ECOLX
cytochrome bd-II oxidase subunit I
NECEvent2014_7_3_scaffold_148_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(817..1674)
DNA (858bp) protein (286aa)
Hydrogenase-1 operon protein HyaF n=1 Tax=Escherichia coli M718 RepID=F4TCK7_ECOLX rbh
hyaF; hydrogenase-1 operon protein HyaF
HyaF protein {ECO:0000313|EMBL:BAI24833.1}; TaxID=573235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11
NECEvent2014_7_3_scaffold_148_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1671..2069)
DNA (399bp) protein (133aa)
Hydrogenase-1 operon protein HyaE n=435 Tax=Enterobacteriaceae RepID=HYAE_ECOLI
hydrogenase-1 operon protein HyaE
Hydrogenase-1 operon protein hyaE {ECO:0000313|EMBL:ELC10967.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_7_3_scaffold_148_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2066..2653)
DNA (588bp) protein (196aa)
Hydrogenase 1 maturation protease n=436 Tax=Escherichia RepID=HYAD_ECOLI rbh
hydrogenase 1 maturation protease
Hydrogenase expression/formation protein {ECO:0000313|EMBL:ESD71592.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_7_3_scaffold_148_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2650..3357)
DNA (708bp) protein (236aa)
Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit n=736 Tax=Enterobacteriaceae RepID=CYBH_ECO57 rbh
hydrogenase 1 b-type cytochrome subunit
Ni/Fe-hydrogenase, b-type cytochrome subunit {ECO:0000313|EMBL:KEN72556.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_7_3_scaffold_148_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3376..5169)
DNA (1794bp) protein (598aa)
Hydrogenase-1 large chain n=546 Tax=Enterobacteriaceae RepID=MBHL_ECOLI rbh
hyaB; hydrogenase 1 large subunit
Hydrogenase-1 large chain {ECO:0000313|EMBL:EOV81057.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_148_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5166..6284)
DNA (1119bp) protein (373aa)
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6)
Hydrogenase-1 small chain {ECO:0000313|EMBL:EHU26701.1}; EC=1.12.99.6 {ECO:0000313|EMBL:EHU26701.1};; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Hydrogenase-1 small chain n=824 Tax=Enterobacteriaceae RepID=MBHS_ECOL6 rbh
NECEvent2014_7_3_scaffold_148_trna_1
unknown

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6711..6795
DNA (85bp)
transferRNA
NECEvent2014_7_3_scaffold_148_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7005..7664
DNA (660bp) protein (220aa)
Inner membrane protein YccA n=886 Tax=Enterobacteriaceae RepID=YCCA_ECOL6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK49295.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_148_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7755..8084
DNA (330bp) protein (110aa)
Sulfurtransferase {ECO:0000256|PIRNR:PIRNR006223}; EC=2.8.1.- {ECO:0000256|PIRNR:PIRNR006223};; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Sulfurtransferase n=134 Tax=Enterobacteriaceae RepID=J7QZK9_ECOLX
yccK; sulfur transfer protein TusE
NECEvent2014_7_3_scaffold_148_10
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8081..8359)
DNA (279bp) protein (93aa)
Acylphosphatase {ECO:0000256|HAMAP-Rule:MF_01450, ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|HAMAP-Rule:MF_01450, ECO:0000256|RuleBase:RU000553};; Acylphosphate phosphohydrolase {ECO:0000
Acylphosphatase n=10 Tax=Escherichia coli RepID=B7M897_ECO8A
acylphosphatase
NECEvent2014_7_3_scaffold_148_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8469..9644
DNA (1176bp) protein (392aa)
rlmI; 23S rRNA m[5]C1962 methyltransferase monomer, subunit of 23S rRNA m[5]C1962 methyltransferase (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01857, ECO:0000256|SAAS:SAAS00011825}; EC=2.1.1.191 {ECO:0000256|HAMAP-Rule:MF_01857, ECO:0000256|SAAS:SAAS00011815};; 23S rR
Ribosomal RNA large subunit methyltransferase I n=95 Tax=Escherichia RepID=C6EI14_ECOBD rbh
NECEvent2014_7_3_scaffold_148_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9702..10019
DNA (318bp) protein (106aa)
Heat shock protein HspQ n=1422 Tax=Enterobacteriaceae RepID=HSPQ_ECO27
heat shock protein HspQ
Heat shock protein HspQ {ECO:0000256|HAMAP-Rule:MF_01194, ECO:0000256|SAAS:SAAS00016449}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Es
NECEvent2014_7_3_scaffold_148_13
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10064..10477)
DNA (414bp) protein (138aa)
CoA binding domain protein n=1 Tax=Escherichia coli 908555 RepID=V0YGD5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFW53557.1}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii A
NECEvent2014_7_3_scaffold_148_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10650..11312
DNA (663bp) protein (221aa)
UPF0319 protein YccT n=62 Tax=Escherichia coli RepID=YCCT_ECO55 rbh
hypothetical protein
UPF0319 protein YccT {ECO:0000256|HAMAP-Rule:MF_00789}; Flags: Precursor;; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_7_3_scaffold_148_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11408..11866
DNA (459bp) protein (153aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
Methylglyoxal synthase n=47 Tax=Enterobacteriaceae RepID=C3TFL7_ECOLX rbh
NECEvent2014_7_3_scaffold_148_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11898..13952)
DNA (2055bp) protein (685aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
DNA helicase IV n=147 Tax=Escherichia coli PF2_ECOLX">RepID=J7QPF2_ECOLX rbh
UvrD/REP helicase HelD
NECEvent2014_7_3_scaffold_148_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14075..14521
DNA (447bp) protein (149aa)
Inner membrane protein YccF n=741 Tax=Enterobacteriaceae RepID=YCCF_ECOLI rbh
hypothetical protein
Inner membrane protein yccF {ECO:0000313|EMBL:KDG97742.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_3_scaffold_148_18
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14531..16693
DNA (2163bp) protein (721aa)
Inner membrane protein yccS n=1 Tax=Escherichia coli KTE108 RepID=S1IF09_ECOLX rbh
Putative efflux (PET) family inner membrane protein YccS {ECO:0000313|EMBL:CDK69359.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kle
hypothetical protein
NECEvent2014_7_3_scaffold_148_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16656..17285)
DNA (630bp) protein (210aa)
Protein Sxy n=704 Tax=Enterobacteriaceae RepID=SXY_ECOLI rbh
yccR; hypothetical protein
Protein sxy {ECO:0000313|EMBL:END93992.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867
NECEvent2014_7_3_scaffold_148_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17504..18013
DNA (510bp) protein (170aa)
Cell division inhibitor SulA n=934 Tax=Enterobacteriaceae RepID=SULA_ECOLX rbh
cell division inhibitor SulA
Cell division inhibitor SulA {ECO:0000256|HAMAP-Rule:MF_01179, ECO:0000256|SAAS:SAAS00088372}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
NECEvent2014_7_3_scaffold_148_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18370..18498
DNA (129bp) protein (43aa)
Outer membrane protein A n=4 Tax=Escherichia coli RepID=M8S9D9_ECOLX
ompA; Outer membrane protein A
OmpA protein {ECO:0000313|EMBL:CAU96868.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain
Displaying 22 items

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