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NECEvent2014_7_3_scaffold_161

Alias: 177_003_scaffold_161

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_161_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..691
DNA (690bp) protein (230aa)
Uncharacterized protein n=9 Tax=Escherichia coli RepID=D2NI66_ECOS5 rbh
ompG; Outer membrane protein G
Outer membrane protein G {ECO:0000313|EMBL:ENH09724.1}; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_161_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(802..1800)
DNA (999bp) protein (333aa)
Uncharacterized HTH-type transcriptional regulator YcjW n=173 Tax=Escherichia RepID=YCJW_ECOLI rbh
ycjW; putative DNA-binding transcriptional regulator
Helix-turn-helix family protein {ECO:0000313|EMBL:KDY94369.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_3_scaffold_161_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1956..3353
DNA (1398bp) protein (466aa)
Conserved protein n=17 Tax=Escherichia coli RepID=C6EFR1_ECOBD rbh
hypothetical protein
YcjX family protein {ECO:0000313|EMBL:EGB68757.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli T
NECEvent2014_7_3_scaffold_161_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3350..4411
DNA (1062bp) protein (354aa)
UPF0283 membrane protein YcjF n=565 Tax=Escherichia RepID=YCJF_ECO45 rbh
ycjF; putative inner membrane protein
UPF0283 membrane protein YcjF {ECO:0000256|HAMAP-Rule:MF_01085}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_7_3_scaffold_161_5
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4559..6100
DNA (1542bp) protein (514aa)
Transcriptional regulatory protein TyrR n=301 Tax=Enterobacteriaceae RepID=TYRR_ECOLI rbh
tyrR; DNA-binding transcriptional regulator TyrR
Transcriptional regulatory protein tyrR {ECO:0000313|EMBL:EGI96806.1}; TaxID=766141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="S
NECEvent2014_7_3_scaffold_161_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6144..6650)
DNA (507bp) protein (169aa)
Thiol peroxidase n=1117 Tax=Enterobacteriaceae RepID=TPX_ECO57 rbh
tpx; thiol peroxidase
Lipid hydroperoxide peroxidase {ECO:0000313|EMBL:AFH11050.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_7_3_scaffold_161_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6769..7734
DNA (966bp) protein (322aa)
L-Ala-D/L-Glu epimerase {ECO:0000313|EMBL:KDX87526.1}; EC=5.1.1.- {ECO:0000313|EMBL:KDX87526.1};; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
L-Ala-D/L-Glu epimerase n=133 Tax=Escherichia RepID=AEEP_ECOLI rbh
ycjG; L-Ala-D/L-Glu epimerase
NECEvent2014_7_3_scaffold_161_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7709..8437)
DNA (729bp) protein (243aa)
Protein MpaA n=455 Tax=Enterobacteriaceae RepID=MPAA_ECO57 rbh
peptidase M14 carboxypeptidase A
Zinc carboxypeptidase {ECO:0000313|EMBL:EFK27619.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_7_3_scaffold_161_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8728..9378)
DNA (651bp) protein (217aa)
Uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=D7XYI0_ECOLX rbh
NmrA family protein {ECO:0000313|EMBL:EQZ93732.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
ymjC; putative NAD(P) binding enzyme
NECEvent2014_7_3_scaffold_161_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9384..10316)
DNA (933bp) protein (311aa)
Uncharacterized protein n=24 Tax=Escherichia coli RepID=D7YQ35_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:EOW08517.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_7_3_scaffold_161_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10316..11236)
DNA (921bp) protein (307aa)
Hydrolase n=3 Tax=Escherichia coli RepID=L3BLH8_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:KDX47249.1}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein rbh
NECEvent2014_7_3_scaffold_161_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11374..12273
DNA (900bp) protein (300aa)
Uncharacterized HTH-type transcriptional regulator YcjZ n=170 Tax=Enterobacteriaceae RepID=YCJZ_ECOLI rbh
ycjZ; DNA-binding transcriptional regulator, LYSR-type rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EFK15710.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_3_scaffold_161_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12610..14223
DNA (1614bp) protein (538aa)
Periplasmic murein peptide-binding protein n=324 Tax=Escherichia RepID=MPPA_ECOLI rbh
Periplasmic murein peptide-binding protein {ECO:0000313|EMBL:KDY62912.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
extracellular solute-binding protein family 5 rbh
NECEvent2014_7_3_scaffold_161_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14274..15305)
DNA (1032bp) protein (344aa)
Low conductance mechanosensitive channel YnaI n=712 Tax=Enterobacteriaceae RepID=YNAI_ECO57 rbh
ynaI; inner membrane protein
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:ESD99104.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
NECEvent2014_7_3_scaffold_161_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15549..15806
DNA (258bp) protein (86aa)
Uncharacterized protein YnaJ n=1383 Tax=Enterobacteriaceae RepID=YNAJ_ECO57
hypothetical protein
Inner membrane protein {ECO:0000313|EMBL:EQN28593.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_161_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15856..16806)
DNA (951bp) protein (317aa)
Universal stress protein E n=1135 Tax=Enterobacteriaceae RepID=USPE_ECO57 rbh
universal stress protein E UspE
Universal stress protein E {ECO:0000313|EMBL:KDZ38865.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_7_3_scaffold_161_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16958..17710)
DNA (753bp) protein (251aa)
CRP/FNR family transcriptional regulator n=1 Tax=Escherichia coli B088 RepID=D6HWA1_ECOLX rbh
fumarate and nitrate reduction regulatory protein
Transcriptional regulator {ECO:0000313|EMBL:EZD90512.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
Displaying 17 items

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