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NECEvent2014_7_3_scaffold_227

Alias: 177_003_scaffold_227

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_227_1
unknown

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1..93
DNA (93bp) protein (31aa)

This feature has no annotations

NECEvent2014_7_3_scaffold_227_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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77..538
DNA (462bp) protein (154aa)
Uncharacterized protein n=216 Tax=Enterobacteriaceae RepID=J7QDU7_ECOLX rbh
putative inner membrane protein
Inner membrane protein ymfA {ECO:0000313|EMBL:EOV64040.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_3_scaffold_227_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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535..912
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Escherichia coli 1.2264 RepID=I2SP74_ECOLX
ycfZ; putative inner membrane protein
Homolog of virulence factor {ECO:0000313|EMBL:CCK46375.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_7_3_scaffold_227_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1441..2280)
DNA (840bp) protein (280aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1444116 speci
NAD-dependent protein deacylase n=1 Tax=Escherichia coli KOEGE 3 (4a) RepID=U0B0U2_ECOLX rbh
NAD-dependent deacetylase
NECEvent2014_7_3_scaffold_227_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2296..3207)
DNA (912bp) protein (304aa)
N-acetyl-D-glucosamine kinase {ECO:0000256|HAMAP-Rule:MF_01271, ECO:0000256|SAAS:SAAS00012116}; EC=2.7.1.59 {ECO:0000256|HAMAP-Rule:MF_01271, ECO:0000256|SAAS:SAAS00012130};; GlcNAc kinase {ECO:000025
N-acetyl-D-glucosamine kinase n=565 Tax=Enterobacteriaceae RepID=NAGK_ECO55 rbh
ROK family protein
NECEvent2014_7_3_scaffold_227_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3236..4474)
DNA (1239bp) protein (413aa)
Lipoprotein-releasing system transmembrane protein LolE n=335 Tax=Escherichia RepID=LOLE_ECOLI rbh
lolE; outer membrane-specific lipoprotein transporter subunit LolE
Lipoprotein releasing system, transmembrane protein LolE {ECO:0000313|EMBL:EFZ60888.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
NECEvent2014_7_3_scaffold_227_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4480..5181)
DNA (702bp) protein (234aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; Ta
ABC transporter, ATP-binding protein n=1 Tax=Escherichia coli P12b RepID=H9UTJ5_ECOLX rbh
lolD; lipoprotein transporter ATP-binding subunit
NECEvent2014_7_3_scaffold_227_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5174..6373)
DNA (1200bp) protein (400aa)
Lipoprotein-releasing system transmembrane protein lolC n=6 Tax=Escherichia coli RepID=L3EZZ2_ECOLX rbh
lipoprotein releasing system transmembrane protein LolC/E family
Lipo-releasing system transmembrane protein lolC {ECO:0000313|EMBL:EMX06322.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_7_3_scaffold_227_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6635..7708
DNA (1074bp) protein (358aa)
Acyltransferase family protein n=17 Tax=Escherichia coli RepID=H5FCW1_ECOLX rbh
Inner membrane protein YcfT {ECO:0000313|EMBL:KEJ64012.1}; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
ycfT; hypothetical protein
NECEvent2014_7_3_scaffold_227_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7788..11282
DNA (3495bp) protein (1165aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1182671 species="Bacteria; P
Transcription-repair-coupling factor n=11 Tax=Escherichia coli RepID=L3IBG5_ECOLX rbh
transcription-repair coupling factor
NECEvent2014_7_3_scaffold_227_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11429..12388
DNA (960bp) protein (320aa)
Uncharacterized protein n=699 Tax=Escherichia RepID=B6I9J1_ECOSE rbh
hypothetical protein
LysM domain protein {ECO:0000313|EMBL:EGW93682.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli S
NECEvent2014_7_3_scaffold_227_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12471..12728)
DNA (258bp) protein (86aa)
Multiple stress resistance protein BhsA n=1228 Tax=Enterobacteriaceae RepID=BHSA_ECO57
hypothetical protein
Stress resistance and biofilm formation protein {ECO:0000313|EMBL:EHW20692.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_7_3_scaffold_227_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12906..13601
DNA (696bp) protein (232aa)
Transcriptional regulator, TetR family n=107 Tax=Enterobacteriaceae RepID=E0IVC7_ECOLW rbh
ycfQ; hypothetical protein
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EGB86695.1}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_7_3_scaffold_227_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13663..14202)
DNA (540bp) protein (180aa)
Uncharacterized protein YcfJ n=809 Tax=Enterobacteriaceae RepID=YCFJ_ECOL6 rbh
ycfJ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN81568.1}; YcfJ protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_7_3_scaffold_227_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14429..15064)
DNA (636bp) protein (212aa)
NADH dehydrogenase n=1 Tax=Escherichia coli P0304777.11 RepID=N3TP69_ECOLX
respiratory NADH dehydrogenase 2/cupric reductase
NADH dehydrogenase {ECO:0000313|EMBL:EQN28386.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H
Displaying 15 items

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