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NECEvent2014_7_3_scaffold_342

Alias: 177_003_scaffold_342

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_342_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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59..226
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=2069 Tax=Enterobacteriaceae RepID=RL33_CITK8
rpmG; 50S ribosomal subunit protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1412525 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonel
NECEvent2014_7_3_scaffold_342_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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324..1133
DNA (810bp) protein (270aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
mutM; formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=73 Tax=Escherichia RepID=D8ALE2_ECOLX rbh
NECEvent2014_7_3_scaffold_342_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1172..1651)
DNA (480bp) protein (160aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=552 Tax=Escherichia RepID=COAD_ECO45 rbh
coad; Phosphopantetheine adenylyltransferase
NECEvent2014_7_3_scaffold_342_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1659..2936)
DNA (1278bp) protein (426aa)
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) n=42 Tax=Escherichia RepID=B7NPD9_ECO7I rbh
waaA; 3-deoxy-D-manno-octulosonic-acid transferase rbh
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EQY56642.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_7_3_scaffold_342_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3349..4407
DNA (1059bp) protein (353aa)
Lipopolysaccharide core biosynthesis protein RfaQ n=568 Tax=Enterobacteriaceae RepID=C3SMG7_ECOLX rbh
lipopolysaccharide core biosynthesis protein
Putative LPS biosynthesis enzyme {ECO:0000313|EMBL:AAG58776.1}; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_7_3_scaffold_342_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4404..5528
DNA (1125bp) protein (375aa)
Lipopolysaccharide core biosynthesis protein rfaG {ECO:0000313|EMBL:KEJ43919.1}; EC=2.4.-.- {ECO:0000313|EMBL:KEJ43919.1};; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Entero
UDP-glucose:(Heptosyl) LPS alpha1,3-glucosyltransferase WaaG n=384 Tax=Enterobacteriaceae RepID=Q9R2L8_ECOLX rbh
glucosyltransferase I RfaG
NECEvent2014_7_3_scaffold_342_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5521..6318
DNA (798bp) protein (266aa)
Lipopolysaccharide core heptose(I) kinase {ECO:0000256|PIRNR:PIRNR037318}; EC=2.7.1.- {ECO:0000256|PIRNR:PIRNR037318};; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobact
Lipopolysaccharide core heptose(I) kinase RfaP n=219 Tax=Enterobacteriaceae RepID=RFAP_ECOLX rbh
lipopolysaccharide core biosynthesis protein RfaP
NECEvent2014_7_3_scaffold_342_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6334..7350
DNA (1017bp) protein (339aa)
UDP-glucose:(Glucosyl) LPS alpha1,3-glucosyltransferase WaaO n=108 Tax=Enterobacteriaceae RepID=Q9ZIS5_ECOLX rbh
rfaI; lipopolysaccharide 1,3-galactosyltransferase
Lipopolysaccharide 3-alpha-galactosyltransferase {ECO:0000313|EMBL:EGI44217.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_7_3_scaffold_342_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7367..8362
DNA (996bp) protein (332aa)
Lipopolysaccharide 1,2-glucosyltransferase {ECO:0000313|EMBL:EZJ88955.1}; EC=2.4.1.58 {ECO:0000313|EMBL:EZJ88955.1};; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacter
Lipopolysaccharide 1,2-glucosyltransferase n=17 Tax=Escherichia coli RepID=N2FZZ5_ECOLX rbh
waaT; UDP-galactose:(glucosyl) LPS a1,2-galactosyltransferase
NECEvent2014_7_3_scaffold_342_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8372..9064
DNA (693bp) protein (231aa)
Lipopolysaccharide core heptose(II) kinase rfaY n=17 Tax=Escherichia coli RepID=N2FRZ0_ECOLX rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KHH06699.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
lipopolysaccharide core biosynthesis protein
NECEvent2014_7_3_scaffold_342_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9090..10118
DNA (1029bp) protein (343aa)
UDP-galactose:(Galactosyl) LPS alpha1,2-galactosyltransferase WaaW n=23 Tax=Escherichia coli RepID=Q9ZIS1_ECOLX rbh
Glycosyl transferase 8 C-terminal family protein {ECO:0000313|EMBL:EZJ68510.1}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
UDP-galactose LPS alpha1,2-galactosyltransferase WaaW
NECEvent2014_7_3_scaffold_342_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10150..10923
DNA (774bp) protein (258aa)
LPS glycosyltransferase n=22 Tax=Escherichia coli RepID=E1IWY5_ECOLX rbh
Glycosyltransferase 25 family protein {ECO:0000313|EMBL:EZJ68509.1}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
hypothetical protein rbh
NECEvent2014_7_3_scaffold_342_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10958..12211
DNA (1254bp) protein (418aa)
Lipid A-core:surface polymer ligase WaaL n=19 Tax=Escherichia coli RepID=B3HFL5_ECOLX rbh
Putative membrane protein {ECO:0000313|EMBL:EZJ68508.1}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
waaL; lipid A-core:surface polymer ligase WaaL
NECEvent2014_7_3_scaffold_342_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12293..12370)
DNA (78bp) protein (26aa)
Integrase core domain protein (Fragment) n=1 Tax=Escherichia coli P0304816.2 RepID=N4BU24_ECOLX
Transposase {ECO:0000313|EMBL:AJB52133.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
transposase InsC3 for insertion sequence ISEc9
Displaying 14 items

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