ggKbase home page

NECEvent2014_7_3_scaffold_350

Alias: 177_003_scaffold_350

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_350_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..142)
DNA (141bp) protein (47aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Escherichia coli STEC_MHI813 RepID=G2C630_ECOLX
hypothetical protein
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:KDY16721.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_7_3_scaffold_350_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161..604)
DNA (444bp) protein (148aa)
PTS system galactitol-specific EIIA component, Gat family n=2 Tax=Escherichia coli RepID=K3KEG7_ECOLX
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein {ECO:0000313|EMBL:EMX03758.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteria
putative PTS IIA-like nitrogen-regulatory protein PtsN
NECEvent2014_7_3_scaffold_350_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(932..1687)
DNA (756bp) protein (252aa)
Transcriptional regulator, DeoR family n=1 Tax=Escherichia coli 3006 RepID=K3IPY7_ECOLX rbh
DeoR family transcriptional regulator rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ESD41471.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_7_3_scaffold_350_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2035..2571
DNA (537bp) protein (179aa)
Ribose-5-phosphate isomerase B domain protein {ECO:0000313|EMBL:KDY16718.1}; EC=5.3.1.6 {ECO:0000313|EMBL:KDY16718.1};; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobact
Ribose 5-phosphate isomerase B n=1 Tax=Escherichia coli 3006 RepID=K3JK16_ECOLX rbh
RpiB/LacA/LacB family sugar-phosphate isomerase rbh
NECEvent2014_7_3_scaffold_350_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2575..3945
DNA (1371bp) protein (457aa)
PTS system, galactitol-specific IIC component n=45 Tax=Escherichia coli RepID=E2QNK6_ECOLX rbh
PTS system, galactitol-specific IIC component
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:EZK05735.1}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_7_3_scaffold_350_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3969..4253
DNA (285bp) protein (95aa)
ATC8739 n=52 Tax=Enterobacteriaceae RepID=E4UEF9_ECOLX
hypothetical protein
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EMX03762.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_7_3_scaffold_350_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4264..4728
DNA (465bp) protein (155aa)
Galactitol-specific enzyme IIA of phosphotransferase system n=49 Tax=Enterobacteriaceae RepID=E2QNK7_ECOLX rbh
Galactitol-specific enzyme IIA of phosphotransferase system
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein {ECO:0000313|EMBL:EMX03763.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteria
NECEvent2014_7_3_scaffold_350_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4774..5739)
DNA (966bp) protein (322aa)
Transcriptional regulator, DeoR family n=5 Tax=Escherichia coli RepID=B1IZR1_ECOLC rbh
Putative sugar-binding domain protein {ECO:0000313|EMBL:EMX03764.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
DeoR family transcriptional regulator rbh
NECEvent2014_7_3_scaffold_350_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5913..6839)
DNA (927bp) protein (309aa)
L,D-transpeptidase linking Lpp to murein n=2 Tax=Escherichia coli RepID=S1HU35_ECOLX rbh
L,D-transpeptidase linking Lpp to murein {ECO:0000313|EMBL:ELC08202.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
hypothetical protein rbh
NECEvent2014_7_3_scaffold_350_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6901..7980)
DNA (1080bp) protein (360aa)
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=6 Tax=Escherichia coli RepID=COBT_ECOLC rbh
NECEvent2014_7_3_scaffold_350_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7992..8735)
DNA (744bp) protein (248aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
Cobalamin synthase n=3 Tax=Escherichia coli RepID=S1EIT9_ECOLX rbh
cobS; cobalamin synthase
NECEvent2014_7_3_scaffold_350_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8732..9274)
DNA (543bp) protein (181aa)
Adenosylcobinamide kinase (EC:2.7.1.156 2.7.7.62)
Bifunctional adenosylcobalamin biosynthesis protein CobU {ECO:0000313|EMBL:EFU32417.1}; EC=2.7.1.156 {ECO:0000313|EMBL:EFU32417.1};; EC=2.7.7.62 {ECO:0000313|EMBL:EFU32417.1};; TaxID=679202 species="B
Cobinamide kinase/cobinamide phosphate guanylyltransferase n=190 Tax=Enterobacteriaceae RepID=J7R5T2_ECOLX rbh
NECEvent2014_7_3_scaffold_350_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9736..10065)
DNA (330bp) protein (110aa)
Putative alpha helix protein n=1 Tax=Shigella boydii serotype 4 (strain Sb227) RepID=Q323K5_SHIBS
hypothetical protein
UPF0265 protein YeeX {ECO:0000256|HAMAP-Rule:MF_00683}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_350_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10237..11295)
DNA (1059bp) protein (353aa)
Inner membrane protein YeeA n=305 Tax=Enterobacteriaceae RepID=YEEA_ECOLI rbh
yeeA; hypothetical protein
Inner membrane protein yeeA {ECO:0000313|EMBL:EQX88111.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_3_scaffold_350_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11494..11967)
DNA (474bp) protein (158aa)
DNA gyrase inhibitor n=64 Tax=Escherichia coli RepID=B1IZQ4_ECOLC rbh
sbmC; DNA gyrase inhibitor
DNA gyrase inhibitor {ECO:0000256|HAMAP-Rule:MF_01896}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_350_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12086..12241)
DNA (156bp) protein (52aa)
dacD; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase dacD {ECO:0000313|EMBL:EZK22031.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EZK22031.1};; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteria
D-alanyl-D-alanine carboxypeptidase dacD n=1 Tax=Escherichia coli 2875000 RepID=M8SC77_ECOLX
Displaying 16 items

View Taxonomy