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NECEvent2014_7_3_scaffold_517

Alias: 177_003_scaffold_517

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_517_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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108..1424
DNA (1317bp) protein (439aa)
L-fucose-proton symporter n=585 Tax=Enterobacteriaceae RepID=FUCP_ECOLI rbh
L-fucose transporter
L-fucose-proton symporter {ECO:0000313|EMBL:EQY57195.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_517_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1457..3232
DNA (1776bp) protein (592aa)
fucI; L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SA
L-fucose isomerase n=114 Tax=Escherichia coli RepID=FUCI_ECO55 rbh
NECEvent2014_7_3_scaffold_517_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3341..4759
DNA (1419bp) protein (473aa)
L-fuculokinase {ECO:0000256|HAMAP-Rule:MF_00986}; EC=2.7.1.51 {ECO:0000256|HAMAP-Rule:MF_00986};; L-fuculose kinase {ECO:0000256|HAMAP-Rule:MF_00986}; TaxID=1446502 species="Bacteria; Proteobacteria;
L-fuculokinase n=306 Tax=Enterobacteriaceae RepID=B6I6K1_ECOSE rbh
fucK; L-fuculokinase
NECEvent2014_7_3_scaffold_517_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4761..5183
DNA (423bp) protein (141aa)
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAM
L-fucose mutarotase n=1387 Tax=Enterobacteriaceae RepID=FUCM_ECO24
fucU; fucose operon protein FucU
NECEvent2014_7_3_scaffold_517_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5241..5972
DNA (732bp) protein (244aa)
L-fucose operon activator n=767 Tax=Enterobacteriaceae RepID=FUCR_ECOLI rbh
DeoR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EZD33730.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_517_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6016..7116)
DNA (1101bp) protein (367aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rR
Ribosomal RNA large subunit methyltransferase M n=818 Tax=Enterobacteriaceae RepID=RLMM_ECO24 rbh
ygdE; putative RNA 2'-O-ribose methyltransferase
NECEvent2014_7_3_scaffold_517_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7109..7504)
DNA (396bp) protein (132aa)
UPF0382 inner membrane protein YgdD n=1299 Tax=Enterobacteriaceae RepID=YGDD_ECO57
ygdD; hypothetical protein
Conserved predicted inner membrane protein {ECO:0000313|EMBL:CAS10622.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_7_3_scaffold_517_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7523..8440)
DNA (918bp) protein (306aa)
Glycine cleavage system transcriptional activator n=1321 Tax=Enterobacteriaceae RepID=GCVA_ECO57 rbh
gcvA; positive regulator of gcv operon
DNA-binding transcriptional activator GcvA {ECO:0000313|EMBL:AFH12599.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_7_3_scaffold_517_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8791..9018)
DNA (228bp) protein (76aa)
Uncharacterized protein n=116 Tax=Enterobacteriaceae RepID=D2NLW6_ECOS5
ygdI; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX83064.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_517_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9210..9323
DNA (114bp) protein (38aa)
Cysteine desulfurase, catalytic subunit CsdA n=2 Tax=Escherichia coli RepID=M9BYN3_ECOLX
csdA; cysteine sulfinate desulfinase
Uncharacterized protein {ECO:0000313|EMBL:CCJ45393.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.
Displaying 10 items

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