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NECEvent2014_7_3_scaffold_549

Alias: 177_003_scaffold_549

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_549_1
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..320)
DNA (318bp) protein (106aa)
YhhN-like family protein n=1 Tax=Escherichia coli 2845650 RepID=M8XPT5_ECOLX
yhhN; hypothetical protein
Putative enzyme yhhN {ECO:0000313|EMBL:EFW50789.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae
NECEvent2014_7_3_scaffold_549_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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461..820
DNA (360bp) protein (120aa)
Uncharacterized protein n=31 Tax=Escherichia coli RepID=L2VHB4_ECOLX
putative receptor
Uncharacterized protein {ECO:0000313|EMBL:ENG99957.1}; TaxID=1116069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_549_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(823..1092)
DNA (270bp) protein (90aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=D7Y0H5_ECOLX
Membrane protein {ECO:0000313|EMBL:EOW03166.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE
hypothetical protein
NECEvent2014_7_3_scaffold_549_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1082..1678)
DNA (597bp) protein (199aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
Ribosomal RNA small subunit methyltransferase D n=840 Tax=Enterobacteriaceae RepID=RSMD_ECOL6 rbh
rsmD; 16S rRNA m(2)G966-methyltransferase
NECEvent2014_7_3_scaffold_549_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1828..3324
DNA (1497bp) protein (499aa)
Signal recognition particle receptor FtsY n=32 Tax=Escherichia coli RepID=A8A5S2_ECOHS rbh
ftsY; cell division protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria
NECEvent2014_7_3_scaffold_549_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3327..3995
DNA (669bp) protein (223aa)
Cell division ATP-binding protein FtsE n=1333 Tax=Enterobacteriaceae RepID=FTSE_ECO57 rbh
cell division protein FtsE
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EKJ12656.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_7_3_scaffold_549_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3988..5046
DNA (1059bp) protein (353aa)
Cell division protein FtsX n=1181 Tax=Enterobacteriaceae RepID=FTSX_ECOL6 rbh
ftsX; putative protein insertion permease FtsX
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_3_scaffold_549_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5291..6145
DNA (855bp) protein (285aa)
RNA polymerase sigma factor RpoH n=1377 Tax=Enterobacteriaceae RepID=RPOH_ECO57 rbh
rpoH; alternative sigma factor RpoH
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteri
NECEvent2014_7_3_scaffold_549_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6416..7519
DNA (1104bp) protein (368aa)
High-affinity amino acid transport protein, periplasmic binding protein n=107 Tax=Escherichia RepID=H9UXY5_ECOLX rbh
livJ; High-affinity amino acid transport protein, periplasmic binding protein
Leu/Ile/Val/Thr-binding protein {ECO:0000313|EMBL:EMW92838.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_3_scaffold_549_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7718..8101)
DNA (384bp) protein (128aa)
Acetyltransferase, GNAT family n=202 Tax=Enterobacteriaceae RepID=A8A5R7_ECOHS
YhhK
Uncharacterized protein {ECO:0000313|EMBL:KDY23226.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_549_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8525..9037
DNA (513bp) protein (171aa)
Leucine-specific-binding protein n=3 Tax=Enterobacteriaceae RepID=F3W3C1_SHIBO
livK; high-affinity branched-chain amino acid ABC transporter periplasmic leucine-specific-binding protein LivK
High-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein LivK {ECO:0000313|EMBL:EDU64401.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobac
Displaying 11 items

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