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NECEvent2014_7_3_scaffold_568

Alias: 177_003_scaffold_568

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_568_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(245..913)
DNA (669bp) protein (223aa)
UPF0758 protein YicR n=849 Tax=Enterobacteriaceae RepID=YICR_ECO24 rbh
radC; DNA repair protein RadC
UPF0758 protein YicR {ECO:0000256|HAMAP-Rule:MF_00018}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_3_scaffold_568_2
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1085..1753
DNA (669bp) protein (223aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=6 Tax=Escherichia coli RepID=H5BY87_ECOLX
Dfp_1 protein {ECO:0000313|EMBL:CEP58001.1}; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
NECEvent2014_7_3_scaffold_568_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1767..2234
DNA (468bp) protein (156aa)
coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase {ECO:0000313|EMBL:CDK46297.1}; EC=4.1.1.36 {ECO:0000313|EMBL:CDK46297.1};; EC=6.3.2.5 {ECO:0000313|EMBL:CDK46297.1};;
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase n=2 Tax=Escherichia coli RepID=M8QKU9_ECOLX
NECEvent2014_7_3_scaffold_568_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2212..2670
DNA (459bp) protein (153aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23) rbh
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1234 Tax=Enterobacteriaceae RepID=DUT_ECO5E rbh
NECEvent2014_7_3_scaffold_568_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2777..3373
DNA (597bp) protein (199aa)
Nucleoid occlusion factor SlmA n=1019 Tax=Enterobacteriaceae RepID=SLMA_ECO24 rbh
slmA; division inhibitor protein
Nucleoid occlusion factor SlmA {ECO:0000256|HAMAP-Rule:MF_01839, ECO:0000256|SAAS:SAAS00010477}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
NECEvent2014_7_3_scaffold_568_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3410..4051)
DNA (642bp) protein (214aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase n=705 Tax=Enterobacteriaceae RepID=PYRE_ECO27 rbh
NECEvent2014_7_3_scaffold_568_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4117..4833)
DNA (717bp) protein (239aa)
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=1033 Tax=Enterobacteriaceae RepID=RNPH_ECO24 rbh
NECEvent2014_7_3_scaffold_568_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4960..5823
DNA (864bp) protein (288aa)
Uncharacterized protein n=662 Tax=Enterobacteriaceae RepID=A7ZTJ5_ECO24 rbh
hypothetical protein rbh
TIGR00255 family protein {ECO:0000313|EMBL:EFU33999.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_568_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6044..6421
DNA (378bp) protein (126aa)
DNA-damage-inducible protein n=5 Tax=Escherichia coli RepID=B7NQ09_ECO7I
dinD; DNA-damage-inducible protein
DNA-damage-inducible protein D {ECO:0000313|EMBL:EKJ11796.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_7_3_scaffold_568_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6461..6868
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=T8M4B5_ECOLX
dinD; DNA-damage-inducible protein D
DNA-damage-inducible protein D {ECO:0000313|EMBL:EGW86571.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_7_3_scaffold_568_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7159..7776
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli M863 RepID=E9YW54_ECOLX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ83007.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_568_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7773..9455)
DNA (1683bp) protein (561aa)
DNA ligase B {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019096}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019091};; Polydeoxyribonucleotide synthase [NAD(+)] B
DNA ligase B n=46 Tax=Bacteria RepID=LIGB_ECOLC rbh
ligB; NAD-dependent DNA ligase LigB
NECEvent2014_7_3_scaffold_568_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9713..10336
DNA (624bp) protein (208aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=1157 Tax=Enterobacteriaceae RepID=KGUA_ECOL5 rbh
gmk; guanylate kinase
NECEvent2014_7_3_scaffold_568_14
Erwinia amylovora, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10391..10480
DNA (90bp) protein (30aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2]
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Escherichia coli RepID=N2JAS1_ECOLX
Displaying 14 items

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