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NECEvent2014_7_3_scaffold_579

Alias: 177_003_scaffold_579

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_579_1
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..94)
DNA (93bp) protein (31aa)
Phage transcriptional regulator n=1 Tax=Escherichia coli KTE40 RepID=S0YLD0_ECOLX
yfjR; CP4-57 prophage; putative DNA-binding transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KDF11921.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
NECEvent2014_7_3_scaffold_579_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(311..1132)
DNA (822bp) protein (274aa)
UPF0380 protein YfjQ n=11 Tax=Escherichia coli RepID=YFJQ_ECOLI rbh
yfjQ; CP4-57 prophage protein rbh
CP4-57 prophage, uncharacterized protein {ECO:0000313|EMBL:AKF73016.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_3_scaffold_579_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1224..2087)
DNA (864bp) protein (288aa)
Uncharacterized protein YfjP n=11 Tax=Escherichia coli RepID=YFJP_ECOLI rbh
yfjP; CP4-57 prophage; GTP-binding protein
CP4-57 prophage, 50S ribosome-binding GTPase family protein {ECO:0000313|EMBL:AKF73015.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
NECEvent2014_7_3_scaffold_579_4
unknown

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comp(2087..2248)
DNA (162bp) protein (54aa)

This feature has no annotations

NECEvent2014_7_3_scaffold_579_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2442..2813)
DNA (372bp) protein (124aa)
Antitoxin RnlB n=10 Tax=Escherichia coli RepID=RNLB_ECOLI
yfjO; CP4-57 prophage protein
CP4-57 prophage, uncharacterized protein {ECO:0000313|EMBL:AKF73014.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_3_scaffold_579_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2806..3879)
DNA (1074bp) protein (358aa)
mRNA endoribonuclease LS n=13 Tax=Bacteria RepID=RNLA_ECOLI rbh
rnlA; CP4-57 prophage; RNase LS
CP4-57 prophage, RNase LS {ECO:0000313|EMBL:AKF56456.1}; Uncharacterized protein yfjN {ECO:0000313|EMBL:CEE05223.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
NECEvent2014_7_3_scaffold_579_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4021..4284
DNA (264bp) protein (88aa)
Uncharacterized protein YfjM n=9 Tax=Escherichia coli RepID=YFJM_ECOLI
yfjM; CP4-57 prophage protein
CP4-57 prophage, uncharacterized protein {ECO:0000313|EMBL:AKF56455.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_3_scaffold_579_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4660..6276
DNA (1617bp) protein (539aa)
Uncharacterized protein YfjL n=12 Tax=Enterobacteriaceae RepID=YFJL_ECOLI rbh
yfjL; CP4-57 prophage protein rbh
CP4-57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein {ECO:0000313|EMBL:AKF56454.1}; Uncharacterized protein {ECO:0000313|EMBL:CEE05227.1}; TaxID=562 species="Bacteria;
NECEvent2014_7_3_scaffold_579_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6273..8462
DNA (2190bp) protein (730aa)
Uncharacterized protein YfjK n=11 Tax=Enterobacteriaceae RepID=YFJK_ECOLI rbh
Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:CEE05228.1}; Radiation resistance protein, DEAD/H helicase-like protein, CP4-57 putative defective prophage {ECO:0000313|EMBL:AKF56453.1}
yfjK; CP4-57 prophage protein
NECEvent2014_7_3_scaffold_579_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8640..8813)
DNA (174bp) protein (58aa)
Phage protein n=1 Tax=Citrobacter sp. KTE151 RepID=R8WLT5_9ENTR
yfjJ; CP4-57 prophage protein
CP4-57 prophage, uncharacterized protein {ECO:0000313|EMBL:AKF56452.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
Displaying 10 items

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