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NECEvent2014_7_3_scaffold_364_1

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(1..192)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU n=1 Tax=Shigella dysenteriae RepID=UPI0003C73C08 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 64.0
  • Bit_score: 124
  • Evalue 2.90e-26
hupA; transcriptional regulator HU subunit alpha similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 64.0
  • Bit_score: 124
  • Evalue 8.10e-27
DNA-binding protein HU-&alpha {ECO:0000313|EMBL:EHU03572.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 64.0
  • Bit_score: 124
  • Evalue 4.00e-26

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
ATGAACAAGACTCAACTGATTGATGTAATTGCAGAGAAAGCAGAACTGTCCAAAACCCAGGCTAAAGCTGCTCTGGAGTCCACTCTGGCTGCAATTACTGAGTCTCTGAAAGAAGGCGATGCTGTACAACTGGTTGGTTTCGGTACCTTCAAAGTGAACCACCGCGCTGAGCGTACTGGCCGCAACCCGCAG
PROTEIN sequence
Length: 64
MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTGRNPQ