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NECEvent2014_7_3_scaffold_364

Alias: 177_003_scaffold_364

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_364_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..192)
DNA (192bp) protein (64aa)
DNA-binding protein HU n=1 Tax=Shigella dysenteriae RepID=UPI0003C73C08
hupA; transcriptional regulator HU subunit alpha
DNA-binding protein HU-&alpha {ECO:0000313|EMBL:EHU03572.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_7_3_scaffold_364_2
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(379..969)
DNA (591bp) protein (197aa)
Uncharacterized protein YjaG n=506 Tax=Enterobacteriaceae RepID=YJAG_ECOLI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV46022.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia s
NECEvent2014_7_3_scaffold_364_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1012..1683)
DNA (672bp) protein (224aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=1 Tax=Escherichia coli IS5 RepID=V6EQL2_ECOLX rbh
nfi; endonuclease V
NECEvent2014_7_3_scaffold_364_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1693..2757)
DNA (1065bp) protein (355aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=541 Tax=cellular organisms RepID=DCUP_ECO24 rbh
NECEvent2014_7_3_scaffold_364_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2797..3570)
DNA (774bp) protein (258aa)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=1182680 species="Bacteria; P
NADH pyrophosphatase n=510 Tax=cellular organisms RepID=NUDC_ECO24 rbh
nudC; NADH pyrophosphatase
NECEvent2014_7_3_scaffold_364_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3665..4141
DNA (477bp) protein (159aa)
Regulator of sigma D n=964 Tax=Enterobacteriaceae RepID=RSD_ECO24 rbh
regulator of RpoD, Rsd/AlgQ
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
NECEvent2014_7_3_scaffold_364_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4375..6270
DNA (1896bp) protein (632aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=53 Tax=Escherichia coli RepID=B2N334_ECOLX rbh
thiC; thiamine biosynthesis protein ThiC
NECEvent2014_7_3_scaffold_364_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6270..6905
DNA (636bp) protein (212aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=214 Tax=Enterobacteriaceae RepID=THIE_ECO24 rbh
thiE; thiamine-phosphate pyrophosphorylase ThiE
NECEvent2014_7_3_scaffold_364_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6898..7653
DNA (756bp) protein (252aa)
Sulfur carrier protein ThiS adenylyltransferase n=399 Tax=Escherichia RepID=THIF_ECOLI rbh
thiamin biosynthesis protein ThiF
Thiazole biosynthesis adenylyltransferase ThiF {ECO:0000313|EMBL:EII47586.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_7_3_scaffold_364_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7637..7837
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=150 Tax=Enterobacteriaceae RepID=A8A791_ECOHS
thiS; sulfur carrier protein ThiS
Sulfur carrier protein ThiS {ECO:0000313|EMBL:ELI19833.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_3_scaffold_364_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7839..8609
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Thiazole synthase n=40 Tax=Enterobacteriaceae RepID=THIG_ECOHS rbh
thiG; thiazole synthase
NECEvent2014_7_3_scaffold_364_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8606..9739
DNA (1134bp) protein (378aa)
Thiamin biosynthesis, thiazole moiety n=122 Tax=Enterobacteriaceae RepID=J7QAX3_ECOLX rbh
thiH; thiamine biosynthesis protein ThiH
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:KDX23594.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_7_3_scaffold_364_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10149..10688)
DNA (540bp) protein (180aa)
Heat shock protein C n=480 Tax=Enterobacteriaceae RepID=HTRC_ECOLI rbh
stationary phase growth adaptation protein
Heat shock protein htrC {ECO:0000313|EMBL:EHW09874.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_364_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10901..11824)
DNA (924bp) protein (308aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Escherichia coli P0305260.13 RepID=N4EGE2_ECOLX
Displaying 14 items

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