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NECEvent2014_7_3_scaffold_1495_5

Organism: NECEvent2014_7_3_Lactobacillus_39_7_hint

partial RP 3 / 55 BSCG 3 / 51 ASCG 0 / 38
Location: 3332..4009

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Lactobacillus casei T71499 RepID=K6RNT4_LACCA similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 226.0
  • Bit_score: 455
  • Evalue 4.30e-125
RepA-like {ECO:0000313|EMBL:ABA12819.1}; TaxID=47714 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 226.0
  • Bit_score: 452
  • Evalue 3.00e-124
repA; putative replication initiation protein similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 224.0
  • Bit_score: 408
  • Evalue 9.90e-112

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Taxonomy

Lactobacillus paracasei → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 678
ATGACAAAATCAACAAATTTTAATTACTATGAAGCCGATAACGTATATGGAGCCTTATTTTTCCAGTTTCCTAAGGTATTAATGTATGGCGAGCAATACAAGCATTTAAGCAGTGACGCTAAATTGGCTTATATGGTACTGAAAGATCGGCTCGAGTATTCTTTGCGCAACAACTGGGTTGATGAAGAAGGGCACGTCTACTTTATTTTTACCAATCAAGAACTAATGGACCTGTTCAACTGTTCGAAGGGAAAATTAGCCAATGTTAAGAAAGAACTAGAAAAAGCTGGCTTACTTTATCAAAAAGCTATGCACTTTAATCCAAAAACAGGTAAAAATGAACCCAACCATCTTTACCTGGCCGAACTAGATATGCAGTCAACTGACGTCTACTTACGCGGTGAATATGGCCAAAAAGAGCCTGAAACCCTTGCTACAAGCGAAAGTCTAAAAAATAGACCTTCGCAGGAGACCGTCGAAACCCTTGCTACAAGCGAAAGTCTAAAAAATAGACCTTCGCGGAAGACCGTTGACGATAACCCTCAAACCCTTGCTGCGAGCGAAAGTCTAAAAAATAGACACGATCTAGATTATACTAATAATTTAGATACTAATAGATACGATATAGATACTCAAAAGTTGGACTTTTCCACAGCCAATTTTTCACCAGCTGAAATT
PROTEIN sequence
Length: 226
MTKSTNFNYYEADNVYGALFFQFPKVLMYGEQYKHLSSDAKLAYMVLKDRLEYSLRNNWVDEEGHVYFIFTNQELMDLFNCSKGKLANVKKELEKAGLLYQKAMHFNPKTGKNEPNHLYLAELDMQSTDVYLRGEYGQKEPETLATSESLKNRPSQETVETLATSESLKNRPSRKTVDDNPQTLAASESLKNRHDLDYTNNLDTNRYDIDTQKLDFSTANFSPAEI