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NECEvent2014_8_1_scaffold_85

Alias: 178_001_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_85_1
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

1..711
DNA (711bp) protein (237aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=GWF2_Clostridiales_38_85_curated
apolipoprotein N-acyltransferase
NECEvent2014_8_1_scaffold_85_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(749..1654)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96649.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative ATPase, BadF/BadG/BcrA/BcrD type
NECEvent2014_8_1_scaffold_85_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1664..2755)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEP5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96648.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_1_scaffold_85_4
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2743..4002)
DNA (1260bp) protein (420aa)
PTS system, lactose/cellobiose-specific IIC component n=2 Tax=Erysipelothrix rhusiopathiae RepID=F5WTW8_ERYRF
PTS system transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix
NECEvent2014_8_1_scaffold_85_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4003..5157)
DNA (1155bp) protein (385aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKW2_9CLOT rbh
anmK; anhydro-N-acetylmuramic acid kinase
NECEvent2014_8_1_scaffold_85_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5213..6112)
DNA (900bp) protein (300aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
murQ; N-acetylmuramic acid 6-phosphate etherase MurQ (EC:4.2.1.126)
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBK7_9FIRM rbh
NECEvent2014_8_1_scaffold_85_7
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6155..7189)
DNA (1035bp) protein (345aa)
membrane protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI000374BBB7 rbh
outer surface protein
Uncharacterized protein {ECO:0000313|EMBL:BAK31905.1}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix r
NECEvent2014_8_1_scaffold_85_8
Lactobacillus shenzhenensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7202..8488)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Lactobacillus shenzhenensis LY-73 RepID=U4TZI5_9LACO rbh
PTS system lactose/cellobiose-specific transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1231336 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus shenzhenensis LY
NECEvent2014_8_1_scaffold_85_9
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

comp(8658..9710)
DNA (1053bp) protein (351aa)
Beta-lactamase family protein n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XEE5_9FIRM rbh
Beta-lactamase family protein {ECO:0000313|EMBL:CDD21983.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
beta-lactamase family protein
NECEvent2014_8_1_scaffold_85_10
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9834..10052
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI00037BF49D
Uncharacterized protein {ECO:0000313|EMBL:EFY09593.1}; TaxID=525280 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix r
hypothetical protein
NECEvent2014_8_1_scaffold_85_11
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10128..10964)
DNA (837bp) protein (279aa)
Putative Transcriptional regulator, RpiR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EWZ4_9CLOT
Putative Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDG00751.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
RpiR family phosphosugar-binding transcriptional regulator
NECEvent2014_8_1_scaffold_85_12
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11035..12210)
DNA (1176bp) protein (392aa)
Sodium/proton antiporter, CPA1 family (TC 2.A.36) n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPG8_ACEAZ rbh
sodium/proton antiporter
Sodium/proton antiporter, CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:ADL12409.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="A
NECEvent2014_8_1_scaffold_85_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12368..13270)
DNA (903bp) protein (301aa)
Cation efflux family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G629_9CLOT rbh
Cation efflux family protein {ECO:0000313|EMBL:CDB16964.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr
cation efflux family protein
NECEvent2014_8_1_scaffold_85_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13455..14189)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96625.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlett
hypothetical protein
NECEvent2014_8_1_scaffold_85_15
unknown

Not on your lists

14309..14608
DNA (300bp) protein (100aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_85_16
unknown

Not on your lists

14753..15079
DNA (327bp) protein (109aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_85_17
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15178..16011)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24T09_DESHY rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE84833.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium
NECEvent2014_8_1_scaffold_85_18
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16041..16415
DNA (375bp) protein (125aa)
Uncharacterized protein n=45 Tax=root RepID=D6ZFX3_MOBCV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDR97109.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
NECEvent2014_8_1_scaffold_85_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16782..18701
DNA (1920bp) protein (640aa)
Tetracycline resistance protein n=25 Tax=Bacteria RepID=F0YZ45_9CLOT rbh
tetracycline resistance protein Tet
Tetracycline resistance protein tetO {ECO:0000313|EMBL:ETD26061.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactar
NECEvent2014_8_1_scaffold_85_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19414..19926
DNA (513bp) protein (171aa)
Sigma-70 region 4 domain protein n=36 Tax=Bacteria RepID=D9SLI1_CLOC7 rbh
DNA-directed RNA polymerase specialized sigma subunit
Uncharacterized protein {ECO:0000313|EMBL:ETD26062.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.
NECEvent2014_8_1_scaffold_85_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20021..20446
DNA (426bp) protein (142aa)
Sigma-70, region 4 n=35 Tax=root RepID=V6W360_STRPY
hypothetical protein
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDM61982.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena D
NECEvent2014_8_1_scaffold_85_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20398..20919)
DNA (522bp) protein (174aa)
Uncharacterized protein n=10 Tax=Firmicutes RepID=B9WSI3_STRSU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDR99462.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15
NECEvent2014_8_1_scaffold_85_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21159..22184
DNA (1026bp) protein (342aa)
Uncharacterized protein n=23 Tax=root RepID=A7VZ31_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD26065.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.
hypothetical protein
NECEvent2014_8_1_scaffold_85_24
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22577..23674
DNA (1098bp) protein (366aa)
Plasmid recombination enzyme n=29 Tax=root RepID=D4L0X2_9FIRM rbh
Plasmid recombination enzyme.
Plasmid recombination enzyme {ECO:0000313|EMBL:EEX20392.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
NECEvent2014_8_1_scaffold_85_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23683..24537
DNA (855bp) protein (285aa)
ParB-like partition proteins n=26 Tax=root RepID=D4L0X3_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD26067.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.
NECEvent2014_8_1_scaffold_85_26
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24583..24813
DNA (231bp) protein (77aa)
Uncharacterized protein conserved in bacteria n=31 Tax=root RepID=D4L0X4_9FIRM
hypothetical protein
Seryl-tRNA synthetase {ECO:0000313|EMBL:ESV55827.1}; TaxID=1154860 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae LMG 1474
NECEvent2014_8_1_scaffold_85_27
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24813..25076
DNA (264bp) protein (88aa)
Uncharacterized protein n=35 Tax=root RepID=A5ZNP1_9FIRM
hypothetical protein
Stage II sporulation protein R {ECO:0000313|EMBL:ESV55826.1}; TaxID=1154860 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae
NECEvent2014_8_1_scaffold_85_28
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25131..26987
DNA (1857bp) protein (619aa)
Site-specific recombinases, DNA invertase Pin homologs n=24 Tax=root RepID=D4L0X6_9FIRM rbh
TnpX site-specific recombinase {ECO:0000313|EMBL:EEX20396.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Site-specific recombinases, DNA invertase Pin homologs
NECEvent2014_8_1_scaffold_85_29
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26910..27311)
DNA (402bp) protein (134aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUJ7_CLOC7
Alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADL52952.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cell
NECEvent2014_8_1_scaffold_85_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27426..28796)
DNA (1371bp) protein (457aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ACD24021.1}; EC=2.1.1.- {ECO:0000313|EMBL:ACD24021.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
RNA methyltransferase n=1 Tax=Clostridium botulinum RepID=UPI0002E83447 rbh
Displaying items 1-30 of 31 in total

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