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NECEvent2014_8_1_scaffold_99

Alias: 178_001_scaffold_99

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_99_1
unknown

Not on your lists

316..513
DNA (198bp) protein (66aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_99_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(983..1594)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T9E0_METSL
pyridoxamine 5'-phosphate oxidase family protein
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:AIY83592.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_8_1_scaffold_99_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1667..2572)
DNA (906bp) protein (302aa)
Regulatory protein DeoR n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DN89_HALPG
deoR-like helix-turn-helix domain protein
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:AIY84551.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bara
NECEvent2014_8_1_scaffold_99_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2665..3411)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H213_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97120.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
binding-protein-dependent transport system inner membrane protein
NECEvent2014_8_1_scaffold_99_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3398..4117)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2W7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97119.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter
NECEvent2014_8_1_scaffold_99_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4117..5037)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCX4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97118.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NlpA lipoprotein
NECEvent2014_8_1_scaffold_99_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5050..6537)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF83_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97117.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
arylsulfotransferase
NECEvent2014_8_1_scaffold_99_8
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6641..7321)
DNA (681bp) protein (227aa)
Predicted membrane protein hemolysin III homolog n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LZU2_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70034.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_8_1_scaffold_99_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7450..8190
DNA (741bp) protein (247aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS70_CLOSA
iII2; exonuclease RNase T and DNA polymerase III
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:AGX42486.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sac
NECEvent2014_8_1_scaffold_99_10
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8225..8938)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1R2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KEZ85840.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_8_1_scaffold_99_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9020..9745)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNJ8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKY29275.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_8_1_scaffold_99_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9866..11050)
DNA (1185bp) protein (395aa)
Probable transporter n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V146_CLOBA rbh
transporter
MFS transporter {ECO:0000313|EMBL:KIL08910.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_1_scaffold_99_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11155..11844
DNA (690bp) protein (230aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQK0_CLOBO rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KIL08909.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinu
CRP
NECEvent2014_8_1_scaffold_99_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11886..12416)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JE14_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32682.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_1_scaffold_99_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12499..13455)
DNA (957bp) protein (319aa)
Fructokinase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZN3_CLOBO
Ribokinase-like domain-containing protein {ECO:0000313|EMBL:AJH01951.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijeri
fructokinase
NECEvent2014_8_1_scaffold_99_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13571..14983)
DNA (1413bp) protein (471aa)
6-phospho-beta-glucosidase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAH0_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU71588.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
glycoside hydrolase
NECEvent2014_8_1_scaffold_99_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14995..16299)
DNA (1305bp) protein (435aa)
PTS system, lactose/cellobiose family IIC subunit n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2G1_CLOB8
PTS system lactose/cellobiose family transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain A
NECEvent2014_8_1_scaffold_99_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16317..17738)
DNA (1422bp) protein (474aa)
Glycosidases (EC:2.4.1.7)
Glycosidases {ECO:0000313|EMBL:CBL13462.1}; EC=2.4.1.7 {ECO:0000313|EMBL:CBL13462.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Rose
Glycosidases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1H2_9FIRM rbh
NECEvent2014_8_1_scaffold_99_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17926..18654)
DNA (729bp) protein (243aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N000_CLOSA
transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:AGX45097.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sacchar
NECEvent2014_8_1_scaffold_99_20
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18774..19760)
DNA (987bp) protein (329aa)
cbh; Choloylglycine hydrolase (EC:3.5.1.24)
Choloylglycine hydrolase {ECO:0000313|EMBL:CDM68924.1}; EC=3.5.1.24 {ECO:0000313|EMBL:CDM68924.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Choloylglycine hydrolase (Conjugated bile acidhydrolase) (Cbah) (Bile salt hydrolase) n=1 Tax=Clostridium sp. CAG:265 RepID=R6KMG9_9CLOT rbh
NECEvent2014_8_1_scaffold_99_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19987..21822)
DNA (1836bp) protein (612aa)
UPI0003D5B655 related cluster n=1 Tax=unknown RepID=UPI0003D5B655
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:ETI87705.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
ABC transport system ATP-binding and permease protein
NECEvent2014_8_1_scaffold_99_22
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21827..23554)
DNA (1728bp) protein (576aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4W8_CLOBU
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJZ87768.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
ABC transport system ATP-binding and permease protein
NECEvent2014_8_1_scaffold_99_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23662..24462
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJJ6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32292.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
MerR family transcriptional regulator
NECEvent2014_8_1_scaffold_99_24
unknown

Not on your lists

25108..25287
DNA (180bp) protein (60aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_99_25
unknown

Not on your lists

comp(25772..25867)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 25 items

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