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NECEvent2014_8_1_scaffold_158

Alias: 178_001_scaffold_158

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_158_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(118..834)
DNA (717bp) protein (239aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
1-acylglycerol-3-phosphate O-acyltransferases domain protein (EC:2.3.1.51)
1-acylglycerol-3-phosphate O-acyltransferase n=2 Tax=Clostridium butyricum RepID=N9YR65_CLOBU rbh
NECEvent2014_8_1_scaffold_158_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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980..1756
DNA (777bp) protein (259aa)
Conserved domain protein n=2 Tax=Clostridium perfringens RepID=Q0TM65_CLOP1
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT70023.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS
NECEvent2014_8_1_scaffold_158_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1791..2651
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028868DE rbh
DegV family protein
DegV domain-containing protein {ECO:0000313|EMBL:KIL07709.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_1_scaffold_158_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2853..5255
DNA (2403bp) protein (801aa)
HAD ATPase, P-type, family IC n=1 Tax=Clostridium colicanis 209318 RepID=N9XWA8_9CLOT rbh
HAD ATPase, P-type, IC family protein
HAD ATPase, P-type, IC family protein {ECO:0000313|EMBL:AIY83960.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii
NECEvent2014_8_1_scaffold_158_trna_1
unknown

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5374..5445
DNA (72bp)
transferRNA
NECEvent2014_8_1_scaffold_158_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5671..8589
DNA (2919bp) protein (973aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1L2K7_CLOBM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA57551.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch
NECEvent2014_8_1_scaffold_158_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8593..9267
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Clostridium botulinum RepID=B1INZ0_CLOBK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEI94949.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;"
NECEvent2014_8_1_scaffold_158_7
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9315..10517)
DNA (1203bp) protein (401aa)
Site-specific recombinase XerD n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MTL5_9CLOT
Integrase {ECO:0000313|EMBL:KEZ84882.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
xerD10; site-specific recombinase XerD
NECEvent2014_8_1_scaffold_158_8
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10530..11006)
DNA (477bp) protein (159aa)
Phage protein with HTH motif n=1 Tax=Clostridium tetani 12124569 RepID=U6F019_CLOTA
phage protein with HTH motif
Phage protein with HTH motif {ECO:0000313|EMBL:CDI50318.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;
NECEvent2014_8_1_scaffold_158_9
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11154..11342
DNA (189bp) protein (63aa)
DNA-binding protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EXM1_CLOTA
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:CDI50317.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
NECEvent2014_8_1_scaffold_158_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11354..11650
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MNI9_9CLOT
Excisionase {ECO:0000313|EMBL:KHD14972.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_8_1_scaffold_158_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11693..12520
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPA2_CLOPF
Putative dNA replication protein {ECO:0000313|EMBL:AIY80341.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202
replication protein
NECEvent2014_8_1_scaffold_158_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13091..13639
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BSK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR19992.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_8_1_scaffold_158_13
unknown

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13687..14712
DNA (1026bp) protein (342aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_158_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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14713..16194
DNA (1482bp) protein (494aa)
Type IV secretory protein VirD4 n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CRD0_THEYO
Type IV secretory protein VirD4 {ECO:0000313|EMBL:ERM92523.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
type IV secretory pathway VirD4 components-like protein
NECEvent2014_8_1_scaffold_158_15
unknown

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16196..17284
DNA (1089bp) protein (363aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_158_16
unknown

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17301..18497
DNA (1197bp) protein (399aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_158_17
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18624..19340
DNA (717bp) protein (239aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH65989.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;
Displaying 18 items

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