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NECEvent2014_8_1_scaffold_167

Alias: 178_001_scaffold_167

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_167_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18..203)
DNA (186bp) protein (62aa)
Transcriptional regulator n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7U9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32712.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional activator ligand binding domain-containing protein
NECEvent2014_8_1_scaffold_167_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(209..643)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M518_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99467.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein DUF2812
NECEvent2014_8_1_scaffold_167_3
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(791..1015)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SKS0_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL53492.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
NECEvent2014_8_1_scaffold_167_4
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1005..1328)
DNA (324bp) protein (108aa)
Transcriptional regulator PadR family protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M519_9CLOT
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:EHI99468.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
PadR family transcriptional regulator
NECEvent2014_8_1_scaffold_167_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1451..2233
DNA (783bp) protein (261aa)
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3F5_9CLOT rbh
pdaA; delta-lactam-biosynthetic de-N-acetylase
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:AIY85013.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium barat
NECEvent2014_8_1_scaffold_167_6
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2336..3169)
DNA (834bp) protein (278aa)
Extracellular solute-binding protein family 3 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SVT5_CLOC7 rbh
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADL53146.1}; Flags: Precursor;; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
NECEvent2014_8_1_scaffold_167_7
Haemophilus pittmaniae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3185..3922)
DNA (738bp) protein (246aa)
ABC transporter, ATP-binding protein n=1 Tax=Haemophilus pittmaniae HK 85 RepID=F9Q8Z0_9PAST rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGV06114.1}; TaxID=1035188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemop
glutamate and aspartate transporter subunit
NECEvent2014_8_1_scaffold_167_8
Aggregatibacter segnis, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3936..4604)
DNA (669bp) protein (223aa)
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Aggregatibacter segnis ATCC 33393 RepID=E6KZ70_9PAST rbh
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:EFU67249.1}; TaxID=888057 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteu
polar amino acid ABC transporter inner membrane subunit
NECEvent2014_8_1_scaffold_167_9
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4594..5253)
DNA (660bp) protein (220aa)
Arginine ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H1I5_HAEHA rbh
Arginine ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:EGT78891.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteur
artM; ArtM protein
NECEvent2014_8_1_scaffold_167_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5681..6328)
DNA (648bp) protein (216aa)
Putative Formiminotransferase-cyclodeaminase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ERT8_9CLOT
formiminotransferase-cyclodeaminase family protein
Formiminotransferase-cyclodeaminase family protein {ECO:0000313|EMBL:AIY84433.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_8_1_scaffold_167_11
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6401..6937)
DNA (537bp) protein (179aa)
Nitroreductase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PW88_9CLOT
Nitroreductase {ECO:0000313|EMBL:EET86502.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
nitroreductase
NECEvent2014_8_1_scaffold_167_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6994..7902)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8G0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98975.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Auxin Efflux Carrier
NECEvent2014_8_1_scaffold_167_13
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7928..9055)
DNA (1128bp) protein (376aa)
Glycosyltransferase n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VTH0_CLOBO rbh
Glycosyl transferase {ECO:0000313|EMBL:KEI12859.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691.;"
glycosyltransferase
NECEvent2014_8_1_scaffold_167_14
Clostridium sp. K25, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9061..10467)
DNA (1407bp) protein (469aa)
Membrane protein involved in the export of O-antigen and teichoic acid, RfbX family n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VTH1_CLOBO rbh
Teichoic acid transporter {ECO:0000313|EMBL:KEI06980.1}; TaxID=1443109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. K25.;"
polysaccharide biosynthesis protein
NECEvent2014_8_1_scaffold_167_15
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10530..11747)
DNA (1218bp) protein (406aa)
O-antigen polymerase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SMZ4_CLOC7
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ADL51860.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC
NECEvent2014_8_1_scaffold_167_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11770..12477)
DNA (708bp) protein (236aa)
putative N-acetylmannosaminyltransferase (EC:2.4.1.187)
UDP-N-acetyl-D-mannosaminuronic acid transferase n=1 Tax=Clostridium botulinum RepID=UPI0002EDBBFF rbh
UDP-N-acetyl-D-mannosaminuronic acid transferase {ECO:0000313|EMBL:KEI02193.1}; TaxID=1443117 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_8_1_scaffold_167_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12489..13643)
DNA (1155bp) protein (385aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNY2_CLOSA
tetratricopeptide TPR_2 repeat protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:AGX42233.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sacchar
NECEvent2014_8_1_scaffold_167_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13669..15387)
DNA (1719bp) protein (573aa)
pgcA; phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase/phosphomannomutase alpha/beta/subunit n=1 Tax=Clostridium sp. CAG:221 RepID=R6FWA9_9CLOT rbh
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:EHI98219.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
NECEvent2014_8_1_scaffold_167_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15515..16102)
DNA (588bp) protein (196aa)
50S ribosomal protein L25 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FA59_9CLOT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1351755 s
ribosomal protein L25, Ctc-form
NECEvent2014_8_1_scaffold_167_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16312..17793
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2K9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97626.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Orn/Lys/Arg decarboxylase major region
NECEvent2014_8_1_scaffold_167_21
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17805..18848)
DNA (1044bp) protein (348aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6L129_9CLOT rbh
Putative membrane protein {ECO:0000313|EMBL:CDB75866.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridi
Displaying 21 items

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