ggKbase home page

NECEvent2014_8_1_scaffold_175

Alias: 178_001_scaffold_175

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_175_1
unknown

Not on your lists

2..103
DNA (102bp) protein (34aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_175_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

100..1080
DNA (981bp) protein (327aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form n=2 Tax=Turicibacter RepID=D4W477_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJU71092.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase family protein
NECEvent2014_8_1_scaffold_175_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1437..2348
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8D1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98887.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
iron ABC transporter
NECEvent2014_8_1_scaffold_175_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2341..3366
DNA (1026bp) protein (342aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BF54_CLOPF
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EDS81556.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
ABC transporter permease
NECEvent2014_8_1_scaffold_175_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3332..4126
DNA (795bp) protein (265aa)
iron ABC transporter n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A1ADA rbh
Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein {ECO:0000313|EMBL:EDS81582.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
iron(III) dicitrate transport system
NECEvent2014_8_1_scaffold_175_6
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4133..4777
DNA (645bp) protein (215aa)
Conserved domain protein n=2 Tax=Turicibacter RepID=D4W472_9FIRM rbh
Conserved domain protein {ECO:0000313|EMBL:EFF64252.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sang
hypothetical protein
NECEvent2014_8_1_scaffold_175_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4787..6241
DNA (1455bp) protein (485aa)
Cobyric acid synthase n=2 Tax=Clostridium perfringens RepID=H7CVA4_CLOPF rbh
cobQ; cobyric acid synthase
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
NECEvent2014_8_1_scaffold_175_8
unknown

Not on your lists

6346..6906
DNA (561bp) protein (187aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_175_9
unknown

Not on your lists

6924..7298
DNA (375bp) protein (125aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_175_10
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7409..8041
DNA (633bp) protein (211aa)
Exopolysaccharide biosynthesis protein n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MSH6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM69222.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_8_1_scaffold_175_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8028..8642
DNA (615bp) protein (205aa)
Putative cyclase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIH3_9CLOT
Putative cyclase {ECO:0000313|EMBL:EKY27377.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cyclase family protein
NECEvent2014_8_1_scaffold_175_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8873..9793
DNA (921bp) protein (307aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:AIY85138.1}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:AIY85138.1};; Aspartate transcarbamylase {E
Aspartate carbamoyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2E0_9CLOT rbh
NECEvent2014_8_1_scaffold_175_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9794..10231
DNA (438bp) protein (146aa)
Aspartate carbamoyltransferase regulatory chain n=2 Tax=Clostridium botulinum B RepID=B2TNG2_CLOBB
aspartate carbamoyltransferase regulatory subunit
Aspartate carbamoyltransferase regulatory chain {ECO:0000313|EMBL:ACD21754.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_8_1_scaffold_175_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10256..11452
DNA (1197bp) protein (399aa)
pyrC; dihydroorotase PyrC (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1345695 species="
Dihydroorotase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNS9_CLOSA
NECEvent2014_8_1_scaffold_175_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11465..12334
DNA (870bp) protein (290aa)
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase
orotidine 5''''-phosphate decarboxylase n=1 Tax=Clostridium botulinum RepID=UPI00035CE278 rbh
NECEvent2014_8_1_scaffold_175_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12358..13101
DNA (744bp) protein (248aa)
diguanylate cyclase n=1 Tax=Clostridium botulinum RepID=UPI0003615EB9 rbh
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1491
dihydroorotate dehydrogenase electron transfer subunit
NECEvent2014_8_1_scaffold_175_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13114..14010
DNA (897bp) protein (299aa)
pyrD; dihydroorotate dehydrogenase 1B (EC:1.3.98.1)
diguanylate cyclase n=1 Tax=Clostridium botulinum RepID=UPI00037A2D67 rbh
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
NECEvent2014_8_1_scaffold_175_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14100..14774
DNA (675bp) protein (225aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000255|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000255|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000255|HAMAP-Rul
Orotate phosphoribosyltransferase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=PYRE_CLOBA rbh
NECEvent2014_8_1_scaffold_175_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14990..17218
DNA (2229bp) protein (743aa)
Formate acetyltransferase {ECO:0000313|EMBL:EHI98244.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EHI98244.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
pflB; formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZS5_9CLOT rbh
NECEvent2014_8_1_scaffold_175_20
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17291..18007
DNA (717bp) protein (239aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
act1; pyruvate formate-lyase-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase activating enzyme n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZS6_9CLOT rbh
NECEvent2014_8_1_scaffold_175_21
unknown

Not on your lists

comp(18053..18169)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 21 items

View Taxonomy