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NECEvent2014_8_1_scaffold_186

Alias: 178_001_scaffold_186

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_186_1
unknown

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3..155
DNA (153bp) protein (51aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_186_2
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(449..1114)
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Blautia sp. CAG:237 RepID=R6KY04_9FIRM rbh
NECEvent2014_8_1_scaffold_186_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1187..2047)
DNA (861bp) protein (287aa)
dacB; D-alanyl-D-alanine carboxypeptidase DacB (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase DacB {ECO:0000313|EMBL:AGX43602.1}; EC=3.4.16.4 {ECO:0000313|EMBL:AGX43602.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
D-alanyl-D-alanine carboxypeptidase DacB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVX9_CLOSA
NECEvent2014_8_1_scaffold_186_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2188..2751
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TQW3_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24290.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_8_1_scaffold_186_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2744..3229
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20397.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ytfJ; sporulation protein YtfJ
NECEvent2014_8_1_scaffold_186_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3293..3922)
DNA (630bp) protein (210aa)
Segregation and condensation protein B n=1 Tax=Clostridium colicanis 209318 RepID=N9XQN0_9CLOT
scpB; segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
NECEvent2014_8_1_scaffold_186_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3894..4643)
DNA (750bp) protein (250aa)
Segregation and condensation protein A n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUL6_CLOB8 rbh
scpA/B family protein
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
NECEvent2014_8_1_scaffold_186_8
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4762..5943)
DNA (1182bp) protein (394aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EHJ00081.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EHJ00081.1};; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridi
penicillin-binding protein DacF (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M3C0_9CLOT rbh
NECEvent2014_8_1_scaffold_186_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6114..7418)
DNA (1305bp) protein (435aa)
Thymidine phosphorylase {ECO:0000313|EMBL:KJU70491.1}; EC=2.4.2.4 {ECO:0000313|EMBL:KJU70491.1};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFX2_9CLOT rbh
NECEvent2014_8_1_scaffold_186_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7439..8608)
DNA (1170bp) protein (390aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|H
Phosphopentomutase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGG0_9CLOT rbh
deoB; phosphopentomutase
NECEvent2014_8_1_scaffold_186_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8662..9540)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WGK7_9CLOT rbh
phage integrase family protein
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_1_scaffold_186_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9626..10258)
DNA (633bp) protein (211aa)
Stage II sporulation protein M n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8S9_9CLOT
Sporulation protein {ECO:0000313|EMBL:KJU70493.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
spoIIM; stage II sporulation protein M
NECEvent2014_8_1_scaffold_186_13
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10531..11064)
DNA (534bp) protein (178aa)
YffH/AdpP family nudix-type nucleoside diphosphatase n=1 Tax=Clostridium colicanis 209318 RepID=N9XQM5_9CLOT
YffH/AdpP family nudix-type nucleoside diphosphatase {ECO:0000313|EMBL:ENZ02013.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
NUDIX domain protein
NECEvent2014_8_1_scaffold_186_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11182..12018)
DNA (837bp) protein (279aa)
Cell wall binding repeat protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQG8_CLOBO
Cell wall binding repeat protein {ECO:0000313|EMBL:EES48648.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 s
surface protein PspC
NECEvent2014_8_1_scaffold_186_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12044..17218)
DNA (5175bp) protein (1725aa)
Fibronectin type III domain protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQG7_CLOBO rbh
Fibronectin {ECO:0000313|EMBL:KIL08941.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
fibronectin type III domain protein
Displaying 15 items

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