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NECEvent2014_8_1_scaffold_295

Alias: 178_001_scaffold_295

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_295_1
unknown

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3..140
DNA (138bp) protein (46aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_295_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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385..900
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NIS6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN37011.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
NECEvent2014_8_1_scaffold_295_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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914..1630
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQ79_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16088.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_1_scaffold_295_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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1747..2157
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46182.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
NECEvent2014_8_1_scaffold_295_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2316..2636
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1Q6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50462.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_8_1_scaffold_295_6
Enterococcus durans, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2861..3580)
DNA (720bp) protein (240aa)
GntR family transcriptional regulator n=1 Tax=Enterococcus durans RepID=UPI00032871A9
GntR family transcriptional regulator {ECO:0000313|EMBL:EMS76754.1}; TaxID=1288492 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus durans
GntR family transcriptional regulator
NECEvent2014_8_1_scaffold_295_7
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3674..4984)
DNA (1311bp) protein (437aa)
PTS system, cellobiose-specific IIC component n=24 Tax=Enterococcus faecalis RepID=K8F5B0_ENTFL
PTS system, cellobiose-specific IIC component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=565642 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ATCC 4200.;
NECEvent2014_8_1_scaffold_295_8
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(5001..5927)
DNA (927bp) protein (309aa)
Uncharacterized protein n=8 Tax=Enterococcus faecalis RepID=E0G0N8_ENTFL
Putative uncharacterized protein {ECO:0000313|EMBL:EEU16127.1}; TaxID=565642 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ATC
PEP phosphonomutase family protein
NECEvent2014_8_1_scaffold_295_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5996..6313)
DNA (318bp) protein (106aa)
PTS system cellobiose-specific transporter subunit IIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DFN8_9FIRM
PTS system lactose/cellobiose family IIB component {ECO:0000313|EMBL:CCZ25209.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus;
NECEvent2014_8_1_scaffold_295_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7627..7821
DNA (195bp) protein (65aa)
Helix-turn-helix family protein n=2 Tax=Clostridium sordellii RepID=T0CF42_CLOSO
Helix-turn-helix family protein {ECO:0000313|EMBL:EPZ57382.1}; TaxID=1292036 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium]
XRE family transcriptional regulator
NECEvent2014_8_1_scaffold_295_11
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7824..8309
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N2F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGK86425.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
NECEvent2014_8_1_scaffold_295_12
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8446..8946
DNA (501bp) protein (167aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5Y6_9CLOT
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:CDE10066.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Cl
flavodoxin/nitric oxide synthase
NECEvent2014_8_1_scaffold_295_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8999..11044)
DNA (2046bp) protein (682aa)
Carbohydrate binding domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N4T6_9FIRM rbh
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EHM89977.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacil
hypothetical protein
NECEvent2014_8_1_scaffold_295_14
unknown

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11467..12021
DNA (555bp) protein (185aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_295_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12024..12224
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CP90_CLOSO
Uncharacterised protein {ECO:0000313|EMBL:CEP89771.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Displaying 15 items

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