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NECEvent2014_8_1_scaffold_389

Alias: 178_001_scaffold_389

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_389_trna_1
unknown

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108..180
DNA (73bp)
transferRNA
NECEvent2014_8_1_scaffold_389_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(541..2214)
DNA (1674bp) protein (558aa)
Putative alkyl hydroperoxide reductase F subunit n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FJI7_9CLOT rbh
Putative alkyl hydroperoxide reductase F subunit {ECO:0000313|EMBL:CDG00839.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
pyridine nucleotide-disulfide oxidoreductase
NECEvent2014_8_1_scaffold_389_2
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2322..2885)
DNA (564bp) protein (188aa)
ahpC; Alkyl hydroperoxide reductase subunit C (EC:1.11.1.15)
Putative Peroxiredoxin n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENI5_9CLOT rbh
Putative Peroxiredoxin {ECO:0000313|EMBL:CDG00840.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
NECEvent2014_8_1_scaffold_389_3
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3101..3454
DNA (354bp) protein (118aa)
ArsC family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GP15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ85297.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_8_1_scaffold_389_4
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3463..4230
DNA (768bp) protein (256aa)
UPF0246 protein Ftrac_0723 n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TRX4_MARTH
hypothetical protein
UPF0246 protein Ftrac_0723 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strai
NECEvent2014_8_1_scaffold_389_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4243..4629
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27253.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_8_1_scaffold_389_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4689..5489)
DNA (801bp) protein (267aa)
Helix-turn-helix domain, rpiR family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VD16_CLOBI rbh
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:EQK38626.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[
RpiR family phosphosugar-binding transcriptional regulator
NECEvent2014_8_1_scaffold_389_7
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5597..6241)
DNA (645bp) protein (215aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=123
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Glycerol-3-phosphate responsive antiterminator family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VBX6_CLOBI rbh
NECEvent2014_8_1_scaffold_389_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6261..7751)
DNA (1491bp) protein (497aa)
PTS system, glucose-like IIB component domain protein {ECO:0000313|EMBL:EQK38624.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQK38624.1};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
PTS system, glucose-like IIB component domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V4I6_CLOBI rbh
PTS system IIB component, Glc family
NECEvent2014_8_1_scaffold_389_9
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7989..9794)
DNA (1806bp) protein (602aa)
CotH protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KJ49_9FIRM rbh
CotH protein
CotH protein {ECO:0000313|EMBL:AGL00520.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibso
NECEvent2014_8_1_scaffold_389_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9858..10475)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AUY4_SYNWW
Uncharacterized protein {ECO:0000313|EMBL:KIE46339.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.
hypothetical protein
Displaying 11 items

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