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NECEvent2014_8_1_scaffold_396

Alias: 178_001_scaffold_396

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_396_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..745)
DNA (744bp) protein (248aa)
Putative ParB-like partition protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUM8_9CLOT rbh
noc; nucleoid occlusion protein
Nucleoid occlusion protein {ECO:0000313|EMBL:AIY82577.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sulliv
NECEvent2014_8_1_scaffold_396_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(879..1598)
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
rsmG; ribosomal RNA small subunit methyltransferase G (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium colicanis 209318 RepID=N9XKJ4_9CLOT
NECEvent2014_8_1_scaffold_396_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1614..3497)
DNA (1884bp) protein (628aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Clostridium botulinum RepID=UPI0003141044
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1415774 species="Bacte
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
NECEvent2014_8_1_scaffold_396_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3510..4889)
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
tRNA modification GTPase mnmE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4T9_9CLOT rbh
trmE; tRNA modification GTPase TrmE
NECEvent2014_8_1_scaffold_396_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5201..5830)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H5A0_9CLOT
putative RNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:KJU71789.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_1_scaffold_396_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5862..6650)
DNA (789bp) protein (263aa)
YidC/Oxa1 family membrane protein insertase n=2 Tax=Clostridium butyricum RepID=R0ABZ1_CLOBU
Protein translocase component YidC {ECO:0000313|EMBL:KHD13896.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
yidC; membrane insertase, YidC/Oxa1 family domain protein
NECEvent2014_8_1_scaffold_396_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6680..6889)
DNA (210bp) protein (70aa)
membrane protein insertion efficiency factor n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=UPI0003B78AB1
putative membrane protein insertion efficiency factor
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
NECEvent2014_8_1_scaffold_396_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6852..7238)
DNA (387bp) protein (129aa)
rnpA; ribonuclease P protein component RnpA (EC:3.1.26.5)
Ribonuclease P protein component n=4 Tax=Clostridium butyricum RepID=B1QSN0_CLOBU
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
NECEvent2014_8_1_scaffold_396_9
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7299..7433)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EI53_CLOPA
ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environ
NECEvent2014_8_1_scaffold_396_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7967..9322
DNA (1356bp) protein (452aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBL2_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
dnaA; chromosomal replication initiator protein DnaA
NECEvent2014_8_1_scaffold_396_11
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9581..10207
DNA (627bp) protein (209aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=999411 species="Bacter
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Clostridium colicanis 209318 RepID=N9XW95_9CLOT
Displaying 11 items

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