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NECEvent2014_8_1_scaffold_409

Alias: 178_001_scaffold_409

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_409_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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176..613
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V3J9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES49741.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
NECEvent2014_8_1_scaffold_409_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1024..1428)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z635_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86836.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
protein-tyrosine phosphatase
NECEvent2014_8_1_scaffold_409_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1434..1799)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QY51_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52348.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_1_scaffold_409_4
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1903..2109)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DBY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI93843.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NECEvent2014_8_1_scaffold_409_5
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2125..2571)
DNA (447bp) protein (149aa)
Membrane protein n=1 Tax=Clostridium intestinale URNW RepID=U2PR56_9CLOT
Membrane protein {ECO:0000313|EMBL:ERK28920.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
membrane protein
NECEvent2014_8_1_scaffold_409_6
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2573..2860)
DNA (288bp) protein (96aa)
Transcriptional regulator n=1 Tax=Clostridium intestinale URNW RepID=U2PR51_9CLOT
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:AAK81256.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutyli
NECEvent2014_8_1_scaffold_409_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3024..3602)
DNA (579bp) protein (193aa)
DNA-binding protein n=1 Tax=Clostridium intestinale URNW RepID=U2N3T2_9CLOT
DNA-binding protein {ECO:0000313|EMBL:CEN71961.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
DNA-binding protein
NECEvent2014_8_1_scaffold_409_8
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3733..4647)
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GA11_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67494.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_8_1_scaffold_409_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4886..5806)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P51 RepID=T4S2M0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE69702.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
hypothetical protein
NECEvent2014_8_1_scaffold_409_10
unknown

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5928..6086
DNA (159bp) protein (53aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_409_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6125..6298
DNA (174bp) protein (58aa)
Transcription regulator, Cro/CI family-related protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q166_CLONN
helix-turn-helix family protein
XRE family transcriptional regulator {ECO:0000313|EMBL:KJU72218.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_1_scaffold_409_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6480..7076)
DNA (597bp) protein (199aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
FMN-dependent NADH-azoreductase n=1 Tax=Clostridium colicanis 209318 RepID=N9WB73_9CLOT rbh
flavodoxin family protein
NECEvent2014_8_1_scaffold_409_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7120..8001)
DNA (882bp) protein (294aa)
Pirin family protein n=2 Tax=Clostridium perfringens RepID=H7CTP3_CLOPF rbh
pirin
Pirin family protein {ECO:0000313|EMBL:EIA18045.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_1_scaffold_409_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8095..8529)
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3L2_CLOPF
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDT71651.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_8_1_scaffold_409_15
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8684..9844)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXJ5_CLOA9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS77502.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
Displaying 15 items

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